Literature DB >> 11695668

Stable three-center hydrogen bonding in a partially rigidified structure.

R D Parra1, H Zeng, J Zhu, C Zheng, X C Zeng, B Gong.   

Abstract

The three-center hydrogen bond in diaryl amide 1 was examined by IR and 1H NMR spectroscopy, X-ray crystallography, and ab initio calculations. By comparing 1 with its structural isomers 2, 3 and 4, and with its conformational isomers 1a-c, it was found that the two two-center components of the three-center interaction reinforce each other, that is, the enhanced stability of the three-center hydrogen bond is a result of positive cooperativity between the two components. Substituents not involved in hydrogen bonding have little effect on the strength of the two- and three-center hydrogen bonds. To our knowledge, this is the first three-center hydrogen-bonding system that has been shown to exhibit positive cooperativity. Ab initio calculations of the geometries, vibrational modes, and 1H NMR chemical shifts also support the experimental findings. These results have provided a new insight into the three-center intramolecular hydrogen bonding in a partially rigidified structure and have provided a reliable motif for designing stably folded structures.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11695668     DOI: 10.1002/1521-3765(20011015)7:20<4352::aid-chem4352>3.0.co;2-l

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  7 in total

1.  Creating nanocavities of tunable sizes: hollow helices.

Authors:  Bing Gong; Huaqiang Zeng; Jin Zhu; Lihua Yuan; Yaohua Han; Shizhi Cheng; Mako Furukawa; Rubén D Parra; Andrey Y Kovalevsky; Jeffrey L Mills; Ewa Skrzypczak-Jankun; Suzana Martinovic; Richard D Smith; Chong Zheng; Thomas Szyperski; Xiao Cheng Zeng; Lihua Yua
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-12       Impact factor: 11.205

2.  Bolaamphiphiles promote phospholipid translocation across vesicle membranes.

Authors:  Christopher C Forbes; Kristy M DiVittorio; Bradley D Smith
Journal:  J Am Chem Soc       Date:  2006-07-19       Impact factor: 15.419

3.  3,4,5-Trimeth-oxy-N-(2-methoxy-phen-yl)benzamide.

Authors:  Aamer Saeed; Ulrich Flörke
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-07-22

4.  N-(2-Meth-oxy-phen-yl)phthalamic acid.

Authors:  Paul G Waddell; Rupert J Rutledge; Jacqueline M Cole
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-05-22

5.  High-resolution crystal structures of protein helices reconciled with three-centered hydrogen bonds and multipole electrostatics.

Authors:  Daniel J Kuster; Chengyu Liu; Zheng Fang; Jay W Ponder; Garland R Marshall
Journal:  PLoS One       Date:  2015-04-20       Impact factor: 3.240

6.  Extremely strong tubular stacking of aromatic oligoamide macrocycles.

Authors:  Mark A Kline; Xiaoxi Wei; Ian J Horner; Rui Liu; Shuang Chen; Si Chen; Ka Yi Yung; Kazuhiro Yamato; Zhonghou Cai; Frank V Bright; Xiao Cheng Zeng; Bing Gong
Journal:  Chem Sci       Date:  2014-09-16       Impact factor: 9.825

7.  The intramolecular hydrogen bonded-halogen bond: a new strategy for preorganization and enhanced binding.

Authors:  Asia Marie S Riel; Daniel A Decato; Jiyu Sun; Casey J Massena; Morly J Jessop; Orion B Berryman
Journal:  Chem Sci       Date:  2018-06-21       Impact factor: 9.825

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.