Literature DB >> 11672867

Recent duplication, domain accretion and the dynamic mutation of the human genome.

E E Eichler1.   

Abstract

An estimated 5% of the human genome consists of interspersed duplications that have arisen over the past 35 million years of evolution. Two categories of such recently duplicated segments can be distinguished: segmental duplications between nonhomologous chromosomes (transchromosomal duplications) and duplications mainly restricted to a particular chromosome (chromosome-specific duplications). Many of these duplications exhibit an extraordinarily high degree of sequence identity at the nucleotide level (>95%) and span large genomic distances (1-100 kb). Preliminary analyses indicate that these same regions are targets for rapid evolutionary turnover among the genomes of closely related primates. The dynamic nature of these regions because of recurrent chromosomal rearrangement, and their ability to create fusion genes from juxtaposed cassettes suggest that duplicative transposition was an important force in the evolution of our genome.

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Year:  2001        PMID: 11672867     DOI: 10.1016/s0168-9525(01)02492-1

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  118 in total

1.  The evolutionary origin of human subtelomeric homologies--or where the ends begin.

Authors:  Christa Lese Martin; Andrew Wong; Alyssa Gross; June Chung; Judy A Fantes; David H Ledbetter
Journal:  Am J Hum Genet       Date:  2002-03-01       Impact factor: 11.025

2.  Segmental duplications in euchromatic regions of human chromosome 5: a source of evolutionary instability and transcriptional innovation.

Authors:  Anouk Courseaux; Florence Richard; Josiane Grosgeorge; Christine Ortola; Agnes Viale; Claude Turc-Carel; Bernard Dutrillaux; Patrick Gaudray; Jean-Louis Nahon
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

3.  Evidence for a fast, intrachromosomal conversion mechanism from mapping of nucleotide variants within a homogeneous alpha-satellite DNA array.

Authors:  Dirk Schindelhauer; Tobias Schwarz
Journal:  Genome Res       Date:  2002-12       Impact factor: 9.043

4.  Theoretical approaches to holistic biological features: Pattern formation, neural networks and the brain-mind relation.

Authors:  Alfred Gierer
Journal:  J Biosci       Date:  2002-06       Impact factor: 1.826

5.  Eucaryotic genome evolution through the spontaneous duplication of large chromosomal segments.

Authors:  Romain Koszul; Sandrine Caburet; Bernard Dujon; Gilles Fischer
Journal:  EMBO J       Date:  2003-12-18       Impact factor: 11.598

6.  Duplication, coclustering, and selection of human Alu retrotransposons.

Authors:  Jerzy Jurka; Oleksiy Kohany; Adam Pavlicek; Vladimir V Kapitonov; Michael V Jurka
Journal:  Proc Natl Acad Sci U S A       Date:  2004-01-21       Impact factor: 11.205

7.  Pericentromeric duplications in the laboratory mouse.

Authors:  James W Thomas; Mary G Schueler; Tyrone J Summers; Robert W Blakesley; Jennifer C McDowell; Pamela J Thomas; Jacquelyn R Idol; Valerie V B Maduro; Shih-Queen Lee-Lin; Jeffrey W Touchman; Gerard G Bouffard; Stephen M Beckstrom-Sternberg; Eric D Green
Journal:  Genome Res       Date:  2003-01       Impact factor: 9.043

8.  A sensitive method for detecting variation in copy numbers of duplicated genes.

Authors:  Gerli Pielberg; Andy E Day; Graham S Plastow; Leif Andersson
Journal:  Genome Res       Date:  2003-09       Impact factor: 9.043

9.  An Alu transposition model for the origin and expansion of human segmental duplications.

Authors:  Jeffrey A Bailey; Ge Liu; Evan E Eichler
Journal:  Am J Hum Genet       Date:  2003-09-22       Impact factor: 11.025

10.  Colloquium paper: footprints of nonsentient design inside the human genome.

Authors:  John C Avise
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-05       Impact factor: 11.205

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