Literature DB >> 11671397

Kinetic Isotope Effects and Transition State Geometries. A Theoretical Investigation of E2 Model Systems.

Sanne Schrøder Glad1, Frank Jensen.   

Abstract

Ab initio calculations at the MP2/6-31+G level have been performed on E2 model systems to investigate whether differences in kinetic isotope effects correlate with changes in transition state geometries. By combining various nucleophiles (NH(2)(-), OH(-), F(-), PH(2)(-), SH(-), Cl(-)) and leaving groups (NH(3), Br(-), Cl(-), F(-), SH(-)) for reactions of the type Nu(-) + CH(3)CH(2)X, a large diversity of transition structures from reactant-like to product-like are generated. For each reaction one primary and two different alpha-secondary kinetic isotope effects are calculated. The primary kinetic isotope effects depend strongly on the nucleophilic placement in the periodic system, which mainly is due to differences in equilibrium isotope effects. When this effect is subtracted, the primary kinetic isotope effects display the expected maximum for symmetric transition structures, although the maximum is broad. The secondary kinetic isotope effects associated with the leaving group provide a qualitative correlation with the hybridization at the carbon, but the corresponding effects at the carbon where the hydrogen abstraction takes place is uncorrelated with the transition state geometry.

Entities:  

Year:  1997        PMID: 11671397     DOI: 10.1021/jo9618379

Source DB:  PubMed          Journal:  J Org Chem        ISSN: 0022-3263            Impact factor:   4.354


  3 in total

1.  Nonperfect synchronization of reaction center rehybridization in the transition state of the hydride transfer catalyzed by dihydrofolate reductase.

Authors:  Jingzhi Pu; Shuhua Ma; Mireia Garcia-Viloca; Jiali Gao; Donald G Truhlar; Amnon Kohen
Journal:  J Am Chem Soc       Date:  2005-10-26       Impact factor: 15.419

2.  Transition-state geometry measurements from (13)c isotope effects. The experimental transition state for the epoxidation of alkenes with oxaziridines.

Authors:  Jennifer S Hirschi; Tetsuya Takeya; Chao Hang; Daniel A Singleton
Journal:  J Am Chem Soc       Date:  2009-02-18       Impact factor: 15.419

3.  Theoretical and Mechanistic Validation of Global Kinetic Parameters of the Inactivation of GABA Aminotransferase by OV329 and CPP-115.

Authors:  Pathum M Weerawarna; Matthew J Moschitto; Richard B Silverman
Journal:  ACS Chem Biol       Date:  2021-03-18       Impact factor: 5.100

  3 in total

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