Literature DB >> 11604507

The gypsy insulator can act as a promoter-specific transcriptional stimulator.

W Wei1, M D Brennan.   

Abstract

Insulators define chromosomal domains such that an enhancer in one domain cannot activate a promoter in a different domain. We show that the Drosophila gypsy insulator behaves as a cis-stimulatory element in the larval fat body. Transcriptional stimulation by the insulator is distance dependent, as expected for a promoter element as opposed to an enhancer. Stimulation of a test alcohol dehydrogenase promoter requires a binding site for a GATA transcription factor, suggesting that the insulator may be facilitating access of this DNA binding protein to the promoter. Short-range stimulation requires both the Suppressor of Hairy-wing protein and the Mod(mdg4)-62.7 protein encoded by the trithorax group gene mod(mdg4). In the absence of interaction with Mod(mdg4)-62.7, the insulator is converted into a short-range transcriptional repressor but retains some cis-stimulatory activity over longer distances. These results indicate that insulator and promoter sequences share important characteristics and are not entirely distinct. We propose that the gypsy insulator can function as a promoter element and may be analogous to promoter-proximal regulatory modules that integrate input from multiple distal enhancer sequences.

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Year:  2001        PMID: 11604507      PMCID: PMC99942          DOI: 10.1128/MCB.21.22.7714-7720.2001

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  60 in total

1.  Differences in insulator properties revealed by enhancer blocking assays on episomes.

Authors:  T J Parnell; P K Geyer
Journal:  EMBO J       Date:  2000-11-01       Impact factor: 11.598

2.  Deletion of an insulator element by the mutation facet-strawberry in Drosophila melanogaster.

Authors:  J Vazquez; P Schedl
Journal:  Genetics       Date:  2000-07       Impact factor: 4.562

3.  Novel genes influencing the expression of the yellow locus and mdg4 (gypsy) in Drosophila melanogaster.

Authors:  P G Georgiev; T I Gerasimova
Journal:  Mol Gen Genet       Date:  1989-12

4.  Functional studies of the BTB domain in the Drosophila GAGA and Mod(mdg4) proteins.

Authors:  D Read; M J Butte; A F Dernburg; M Frasch; T B Kornberg
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

5.  Interactions between the Su(Hw) and Mod(mdg4) proteins required for gypsy insulator function.

Authors:  D Ghosh; T I Gerasimova; V G Corces
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

6.  Transcriptional repression mediated by polycomb group proteins and other chromatin-associated repressors is selectively blocked by insulators.

Authors:  J van der Vlag; J L den Blaauwen; R G Sewalt; R van Driel; A P Otte
Journal:  J Biol Chem       Date:  2000-01-07       Impact factor: 5.157

7.  The Drosophila su(Hw) gene, which controls the phenotypic effect of the gypsy transposable element, encodes a putative DNA-binding protein.

Authors:  S M Parkhurst; D A Harrison; M P Remington; C Spana; R L Kelley; R S Coyne; V G Corces
Journal:  Genes Dev       Date:  1988-10       Impact factor: 11.361

8.  Complex developmental regulation of the Drosophila affinidisjuncta alcohol dehydrogenase gene in Drosophila melanogaster.

Authors:  M D Brennan; W J Dickinson
Journal:  Dev Biol       Date:  1988-01       Impact factor: 3.582

9.  Genetic and molecular complexity of the position effect variegation modifier mod(mdg4) in Drosophila.

Authors:  K Büchner; P Roth; G Schotta; V Krauss; H Saumweber; G Reuter; R Dorn
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

10.  The Drosophila melanogaster suppressor of Hairy-wing protein binds to specific sequences of the gypsy retrotransposon.

Authors:  C Spana; D A Harrison; V G Corces
Journal:  Genes Dev       Date:  1988-11       Impact factor: 11.361

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  12 in total

1.  An endogenous suppressor of hairy-wing insulator separates regulatory domains in Drosophila.

Authors:  Timothy J Parnell; Michaela M Viering; Astrid Skjesol; Cecilia Helou; Emily J Kuhn; Pamela K Geyer
Journal:  Proc Natl Acad Sci U S A       Date:  2003-11-03       Impact factor: 11.205

2.  The Mod(mdg4) component of the Su(Hw) insulator inserted in the P transposon can repress its mobility in Drosophila melanogaster.

Authors:  Marina Karakozova; Ekaterina Savitskaya; Larisa Melnikova; Aleksandr Parshikov; Pavel Georgiev
Journal:  Genetics       Date:  2004-07       Impact factor: 4.562

3.  Transposon-mediated rewiring of gene regulatory networks contributed to the evolution of pregnancy in mammals.

Authors:  Vincent J Lynch; Robert D Leclerc; Gemma May; Günter P Wagner
Journal:  Nat Genet       Date:  2011-09-25       Impact factor: 38.330

4.  Analysis of the effect of the Su(Hw) insulator on the expression of the miniwhite gene in Drosophila melanogaster.

Authors:  E S Mel'nik; G Georgiev; A K Golovnin
Journal:  Dokl Biochem Biophys       Date:  2004 Sep-Oct       Impact factor: 0.788

5.  Drosophila Su(Hw) insulator can stimulate transcription of a weakened yellow promoter over a distance.

Authors:  Anton Golovnin; Elena Melnick; Alexander Mazur; Pavel Georgiev
Journal:  Genetics       Date:  2004-11-01       Impact factor: 4.562

6.  Study of long-distance functional interactions between Su(Hw) insulators that can regulate enhancer-promoter communication in Drosophila melanogaster.

Authors:  Ekaterina Savitskaya; Larisa Melnikova; Margarita Kostuchenko; Elena Kravchenko; Ekaterina Pomerantseva; Tatiana Boikova; Darya Chetverina; Aleksander Parshikov; Polyna Zobacheva; Elena Gracheva; Alexander Galkin; Pavel Georgiev
Journal:  Mol Cell Biol       Date:  2006-02       Impact factor: 4.272

7.  Rationally designed insulator-like elements can block enhancer action in vitro.

Authors:  Vladimir A Bondarenko; Yong I Jiang; Vasily M Studitsky
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

8.  The Role of Insulators in Transgene Transvection in Drosophila.

Authors:  Pawel Piwko; Ilektra Vitsaki; Ioannis Livadaras; Christos Delidakis
Journal:  Genetics       Date:  2019-04-04       Impact factor: 4.562

9.  Evidences for insulator activity of the 5'UTR of the Drosophila melanogaster LTR-retrotransposon ZAM.

Authors:  Crescenzio Francesco Minervini; Simona Ruggieri; Michele Traversa; Leonardo D'Aiuto; Rene' Massimiliano Marsano; Daniela Leronni; Isabella Centomani; Claudio De Giovanni; Luigi Viggiano
Journal:  Mol Genet Genomics       Date:  2010-04-03       Impact factor: 3.291

10.  Functional dissection of the mouse tyrosinase locus control region identifies a new putative boundary activity.

Authors:  Patricia Giraldo; Antonio Martínez; Lucía Regales; Alfonso Lavado; Angel García-Díaz; Angel Alonso; Ana Busturia; Lluís Montoliu
Journal:  Nucleic Acids Res       Date:  2003-11-01       Impact factor: 16.971

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