Literature DB >> 11602357

Cloning, sequence and structure of a gene encoding an antifungal glucan 1,3-beta-glucosidase from Trichoderma atroviride (T. harzianum).

B G Donzelli1, M Lorito, F Scala, G E Harman.   

Abstract

A gene (gluc78) encoding an antifungal glucan 1,3-beta-glucosidase was cloned from strain P1 of the biocontrol fungus Trichoderma atroviride (formerly T. harzianum). A putative regulatory sequence upstream from the coding region was cloned using single-strand extension from a primer in the known portion of the gene, circularized with T4 ligase, and then reamplified with PCR to generate double-stranded DNA. The entire genomic DNA sequence consisted of 3440 bp, with 559 and 579 bp, respectively, in 5' and 3' untranslated regions. The transcription unit contains a single intron, positioned in the 5' untranslated region. The gene encodes for a protein of 770 aa, including a 40 aa signal peptide. Symmetry between the first and second halves of the mature protein was found. The gene is present as a single copy in T. atroviride and a similar gene also is present in T. harzianum and T. virens. The encoded protein has similarity to a small group of sequences from filamentous fungi and no significant similarity to 1,3-beta-glucanases or glucosidases from other organisms. Northern analysis indicates that the gene is repressed in the presence of 3% glucose and expressed in media containing 0.1% of the sugar. Laminarin (0.1%) enhances expression after 18 h and other polymers such as scleroglucan and pustulan may enhance expression after 40 h of growth.

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Year:  2001        PMID: 11602357     DOI: 10.1016/s0378-1119(01)00681-3

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  11 in total

1.  Crystal structure of glycoside hydrolase family 55 {beta}-1,3-glucanase from the basidiomycete Phanerochaete chrysosporium.

Authors:  Takuya Ishida; Shinya Fushinobu; Rie Kawai; Motomitsu Kitaoka; Kiyohiko Igarashi; Masahiro Samejima
Journal:  J Biol Chem       Date:  2009-02-04       Impact factor: 5.157

2.  Expression, purification and crystallization of a family 55 β-1,3-glucanase from Chaetomium thermophilum.

Authors:  Anastassios C Papageorgiou; Duochuan Li
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-05-20       Impact factor: 1.056

3.  Active site and laminarin binding in glycoside hydrolase family 55.

Authors:  Christopher M Bianchetti; Taichi E Takasuka; Sam Deutsch; Hannah S Udell; Eric J Yik; Lai F Bergeman; Brian G Fox
Journal:  J Biol Chem       Date:  2015-03-09       Impact factor: 5.157

4.  Characterization of the Lentinula edodes exg2 gene encoding a lentinan-degrading exo-beta-1,3-glucanase.

Authors:  Yuichi Sakamoto; Ken-ichiro Minato; Masaru Nagai; Masashi Mizuno; Toshitsugu Sato
Journal:  Curr Genet       Date:  2005-10-12       Impact factor: 3.886

5.  Interaction of ammonium, glucose, and chitin regulates the expression of cell wall-degrading enzymes in Trichoderma atroviride strain P1.

Authors:  B G Donzelli; G E Harman
Journal:  Appl Environ Microbiol       Date:  2001-12       Impact factor: 4.792

6.  Proteomic response of the biological control fungus Trichoderma atroviride to growth on the cell walls of Rhizoctonia solani.

Authors:  Jasmine Grinyer; Sybille Hunt; Matthew McKay; Ben R Herbert; Helena Nevalainen
Journal:  Curr Genet       Date:  2005-04-27       Impact factor: 3.886

7.  Characterisation of a Trichoderma hamatum monooxygenase gene involved in antagonistic activity against fungal plant pathogens.

Authors:  Margaret A Carpenter; Hayley J Ridgway; Alison M Stringer; Amanda J Hay; Alison Stewart
Journal:  Curr Genet       Date:  2008-01-30       Impact factor: 3.886

8.  Red rot resistant transgenic sugarcane developed through expression of β-1,3-glucanase gene.

Authors:  Shivani Nayyar; Bipen Kumar Sharma; Ajinder Kaur; Anu Kalia; Gulzar Singh Sanghera; Karanjit Singh Thind; Inderjit Singh Yadav; Jagdeep Singh Sandhu
Journal:  PLoS One       Date:  2017-06-28       Impact factor: 3.240

9.  Production of Lytic Enzymes by Trichoderma Isolates during in vitro Antagonism with Aspergillus Niger, The Causal Agent of Collar ROT of Peanut.

Authors:  H P Gajera; D N Vakharia
Journal:  Braz J Microbiol       Date:  2012-06-01       Impact factor: 2.476

10.  Cultural conditions on the production of extracellular enzymes by Trichoderma isolates from tobacco rhizosphere.

Authors:  K L N Mallikharjuna Rao; K Siva Raju; H Ravisankar
Journal:  Braz J Microbiol       Date:  2016-01-27       Impact factor: 2.476

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