Literature DB >> 11599176

The rates of hydrolysis of thymidyl-3',5'-thymidine-H-phosphonate: the possible role of nucleic acids linked by diesters of phosphorous acid in the origins of life.

J R Peyser1, J P Ferris.   

Abstract

Thymidyl-3',5'-thymidine H-phosphonate undergoes acid, base, and water-catalyzed hydrolysis. The products were 3'-thymidine H-phosphonate, 5'-thymidine H-phosphonate, and thymidine in a ratio of 1:1:2. The rate constants are 1.8 x 10(-3) M-1 sec-1, 7.2 x 10(3) M-1 sec-1, and 1.5 x 10(6) sec-1 for acid, base and water catalysis, respectively. These values are comparable with previous reports for the rates of hydrolysis of simple dialkyl esters of phosphorous acids. The Arrhenius activation energy for the base-catalyzed reaction is 20 kcal/mol. and the enthalpy and entropy of activation are 19 kcal/mol and -14 eu., respectively. The Gibbs free energy of activation is 23 kcal/mol. The rate constants suggest that nucleic acids linked by diesters of phosphorous acid hydrolyze too rapidly in aqueous solution to have accumulated in useful amounts on the primitive Earth.

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Year:  2001        PMID: 11599176     DOI: 10.1023/a:1011871726600

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  5 in total

1.  Use of isobutyloxycarbonyl as a blocking group in preparation of 3'-O-p-monomethyoxytritylthymidine.

Authors:  K K Ogilvie; R L Letsinger
Journal:  J Org Chem       Date:  1967-07       Impact factor: 4.354

2.  Chemical reduction of phosphate on the primitive earth.

Authors:  D Glindemann; R M De Graaf; A W Schwartz
Journal:  Orig Life Evol Biosph       Date:  1999-12       Impact factor: 1.950

3.  Reduction and activation of phosphate on the primitive earth.

Authors:  R M De Graaf; A W Schwartz
Journal:  Orig Life Evol Biosph       Date:  2000-10       Impact factor: 1.950

4.  Synthesis and separation of diastereomers of deoxynucleoside 5'-O-(1-thio)triphosphates.

Authors:  J T Chen; S J Benkovic
Journal:  Nucleic Acids Res       Date:  1983-06-11       Impact factor: 16.971

5.  Synthesis of DNA via deoxynucleoside H-phosphonate intermediates.

Authors:  B C Froehler; P G Ng; M D Matteucci
Journal:  Nucleic Acids Res       Date:  1986-07-11       Impact factor: 16.971

  5 in total
  4 in total

1.  Microbial life and temperature: a semi empirical approach.

Authors:  León Garzón
Journal:  Orig Life Evol Biosph       Date:  2004-08       Impact factor: 1.950

2.  Thermal synthesis of nucleoside H-phosphonates under mild conditions.

Authors:  R M De Graaf; Alan W Schwartz
Journal:  Orig Life Evol Biosph       Date:  2005-02       Impact factor: 1.950

3.  Phosphorus: a case for mineral-organic reactions in prebiotic chemistry.

Authors:  Matthew Pasek; Barry Herschy; Terence P Kee
Journal:  Orig Life Evol Biosph       Date:  2015-03-14       Impact factor: 1.950

4.  Rethinking early Earth phosphorus geochemistry.

Authors:  Matthew A Pasek
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-14       Impact factor: 11.205

  4 in total

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