Literature DB >> 11586302

A radiation hybrid map of mouse genes.

T J Hudson1, D M Church, S Greenaway, H Nguyen, A Cook, R G Steen, W J Van Etten, A B Castle, M A Strivens, P Trickett, C Heuston, C Davison, A Southwell, R Hardisty, A Varela-Carver, A R Haynes, P Rodriguez-Tome, H Doi, M S Ko, J Pontius, L Schriml, L Wagner, D Maglott, S D Brown, E S Lander, G Schuler, P Denny.   

Abstract

A comprehensive gene-based map of a genome is a powerful tool for genetic studies and is especially useful for the positional cloning and positional candidate approaches. The availability of gene maps for multiple organisms provides the foundation for detailed conserved-orthology maps showing the correspondence between conserved genomic segments. These maps make it possible to use cross-species information in gene hunts and shed light on the evolutionary forces that shape the genome. Here we report a radiation hybrid map of mouse genes, a combined project of the Whitehead Institute/Massachusetts Institute of Technology Center for Genome Research, the Medical Research Council UK Mouse Genome Centre, and the National Center for Biotechnology Information. The map contains 11,109 genes, screened against the T31 RH panel and positioned relative to a reference map containing 2,280 mouse genetic markers. It includes 3,658 genes homologous to the human genome sequence and provides a framework for overlaying the human genome sequence to the mouse and for sequencing the mouse genome.

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Year:  2001        PMID: 11586302     DOI: 10.1038/ng1001-201

Source DB:  PubMed          Journal:  Nat Genet        ISSN: 1061-4036            Impact factor:   38.330


  23 in total

1.  The transcriptional activity of human Chromosome 22.

Authors:  John L Rinn; Ghia Euskirchen; Paul Bertone; Rebecca Martone; Nicholas M Luscombe; Stephen Hartman; Paul M Harrison; F Kenneth Nelson; Perry Miller; Mark Gerstein; Sherman Weissman; Michael Snyder
Journal:  Genes Dev       Date:  2003-02-15       Impact factor: 11.361

2.  Comparative sequence analysis of a single-gene conserved segment in mouse and human.

Authors:  James W Thomas; Eric D Green
Journal:  Mamm Genome       Date:  2003-10       Impact factor: 2.957

3.  The comprehensive mouse radiation hybrid map densely cross-referenced to the recombination map: a tool to support the sequence assemblies.

Authors:  Lucy B Rowe; Mary E Barter; Jennifer A Kelmenson; Janan T Eppig
Journal:  Genome Res       Date:  2003-01       Impact factor: 9.043

4.  Comparative mapping in the pig: localization of 214 expressed sequence tags.

Authors:  Susanna Cirera; Claus B Jørgensen; Milena Sawera; Terje Raudsepp; Bhanu P Chowdhary; Merete Fredholm
Journal:  Mamm Genome       Date:  2003-06       Impact factor: 2.957

5.  Identification of lectin-like receptors expressed by antigen presenting cells and neutrophils and their mapping to a novel gene complex.

Authors:  Line Mari Flornes; Yenan T Bryceson; Anne Spurkland; Johnny C Lorentzen; Erik Dissen; Sigbjørn Fossum
Journal:  Immunogenetics       Date:  2004-09-11       Impact factor: 2.846

6.  Integrative genomics: in silico coupling of rat physiology and complex traits with mouse and human data.

Authors:  Simon N Twigger; Jeff Nie; Victor Ruotti; Jiaming Yu; Dan Chen; Dawei Li; Jed Mathis; Vijay Narayanasamy; Gopal R Gopinath; Dean Pasko; Mary Shimoyama; Norberto De La Cruz; Susan Bromberg; Anne E Kwitek; Howard J Jacob; Peter J Tonellato
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

7.  The scale of mutational variation in the murid genome.

Authors:  Daniel J Gaffney; Peter D Keightley
Journal:  Genome Res       Date:  2005-07-15       Impact factor: 9.043

8.  Radiation hybrid map of the porcine genome comprising 2035 EST loci.

Authors:  Anette Rink; Katie Eyer; Benjamin Roelofs; Kimberly J Priest; Kathleen J Sharkey-Brockmeier; Sudkamon Lekhong; Elif K Karajusuf; Jason Bang; Martine Yerle; Denis Milan; Wan-Sheng Liu; Craig W Beattie
Journal:  Mamm Genome       Date:  2006-08-04       Impact factor: 2.957

9.  Fine mapping of regulatory loci for mammalian gene expression using radiation hybrids.

Authors:  Christopher C Park; Sangtae Ahn; Joshua S Bloom; Andy Lin; Richard T Wang; Tongtong Wu; Aswin Sekar; Arshad H Khan; Christine J Farr; Aldons J Lusis; Richard M Leahy; Kenneth Lange; Desmond J Smith
Journal:  Nat Genet       Date:  2008-03-23       Impact factor: 38.330

10.  Every genome sequence needs a good map.

Authors:  Harris A Lewin; Denis M Larkin; Joan Pontius; Stephen J O'Brien
Journal:  Genome Res       Date:  2009-07-13       Impact factor: 9.043

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