Literature DB >> 19596977

Every genome sequence needs a good map.

Harris A Lewin1, Denis M Larkin, Joan Pontius, Stephen J O'Brien.   

Abstract

Mesh:

Year:  2009        PMID: 19596977      PMCID: PMC2775595          DOI: 10.1101/gr.094557.109

Source DB:  PubMed          Journal:  Genome Res        ISSN: 1088-9051            Impact factor:   9.043


× No keyword cloud information.
  37 in total

1.  Initial sequencing and analysis of the human genome.

Authors:  E S Lander; L M Linton; B Birren; C Nusbaum; M C Zody; J Baldwin; K Devon; K Dewar; M Doyle; W FitzHugh; R Funke; D Gage; K Harris; A Heaford; J Howland; L Kann; J Lehoczky; R LeVine; P McEwan; K McKernan; J Meldrim; J P Mesirov; C Miranda; W Morris; J Naylor; C Raymond; M Rosetti; R Santos; A Sheridan; C Sougnez; Y Stange-Thomann; N Stojanovic; A Subramanian; D Wyman; J Rogers; J Sulston; R Ainscough; S Beck; D Bentley; J Burton; C Clee; N Carter; A Coulson; R Deadman; P Deloukas; A Dunham; I Dunham; R Durbin; L French; D Grafham; S Gregory; T Hubbard; S Humphray; A Hunt; M Jones; C Lloyd; A McMurray; L Matthews; S Mercer; S Milne; J C Mullikin; A Mungall; R Plumb; M Ross; R Shownkeen; S Sims; R H Waterston; R K Wilson; L W Hillier; J D McPherson; M A Marra; E R Mardis; L A Fulton; A T Chinwalla; K H Pepin; W R Gish; S L Chissoe; M C Wendl; K D Delehaunty; T L Miner; A Delehaunty; J B Kramer; L L Cook; R S Fulton; D L Johnson; P J Minx; S W Clifton; T Hawkins; E Branscomb; P Predki; P Richardson; S Wenning; T Slezak; N Doggett; J F Cheng; A Olsen; S Lucas; C Elkin; E Uberbacher; M Frazier; R A Gibbs; D M Muzny; S E Scherer; J B Bouck; E J Sodergren; K C Worley; C M Rives; J H Gorrell; M L Metzker; S L Naylor; R S Kucherlapati; D L Nelson; G M Weinstock; Y Sakaki; A Fujiyama; M Hattori; T Yada; A Toyoda; T Itoh; C Kawagoe; H Watanabe; Y Totoki; T Taylor; J Weissenbach; R Heilig; W Saurin; F Artiguenave; P Brottier; T Bruls; E Pelletier; C Robert; P Wincker; D R Smith; L Doucette-Stamm; M Rubenfield; K Weinstock; H M Lee; J Dubois; A Rosenthal; M Platzer; G Nyakatura; S Taudien; A Rump; H Yang; J Yu; J Wang; G Huang; J Gu; L Hood; L Rowen; A Madan; S Qin; R W Davis; N A Federspiel; A P Abola; M J Proctor; R M Myers; J Schmutz; M Dickson; J Grimwood; D R Cox; M V Olson; R Kaul; C Raymond; N Shimizu; K Kawasaki; S Minoshima; G A Evans; M Athanasiou; R Schultz; B A Roe; F Chen; H Pan; J Ramser; H Lehrach; R Reinhardt; W R McCombie; M de la Bastide; N Dedhia; H Blöcker; K Hornischer; G Nordsiek; R Agarwala; L Aravind; J A Bailey; A Bateman; S Batzoglou; E Birney; P Bork; D G Brown; C B Burge; L Cerutti; H C Chen; D Church; M Clamp; R R Copley; T Doerks; S R Eddy; E E Eichler; T S Furey; J Galagan; J G Gilbert; C Harmon; Y Hayashizaki; D Haussler; H Hermjakob; K Hokamp; W Jang; L S Johnson; T A Jones; S Kasif; A Kaspryzk; S Kennedy; W J Kent; P Kitts; E V Koonin; I Korf; D Kulp; D Lancet; T M Lowe; A McLysaght; T Mikkelsen; J V Moran; N Mulder; V J Pollara; C P Ponting; G Schuler; J Schultz; G Slater; A F Smit; E Stupka; J Szustakowki; D Thierry-Mieg; J Thierry-Mieg; L Wagner; J Wallis; R Wheeler; A Williams; Y I Wolf; K H Wolfe; S P Yang; R F Yeh; F Collins; M S Guyer; J Peterson; A Felsenfeld; K A Wetterstrand; A Patrinos; M J Morgan; P de Jong; J J Catanese; K Osoegawa; H Shizuya; S Choi; Y J Chen; J Szustakowki
Journal:  Nature       Date:  2001-02-15       Impact factor: 49.962

2.  Chromosome-specific single-locus FISH probes allow anchorage of an 1800-marker integrated radiation-hybrid/linkage map of the domestic dog genome to all chromosomes.

Authors:  M Breen; S Jouquand; C Renier; C S Mellersh; C Hitte; N G Holmes; A Chéron; N Suter; F Vignaux; A E Bristow; C Priat; E McCann; C André; S Boundy; P Gitsham; R Thomas; W L Bridge; H F Spriggs; E J Ryder; A Curson; J Sampson; E A Ostrander; M M Binns; F Galibert
Journal:  Genome Res       Date:  2001-10       Impact factor: 9.043

3.  Comparative genome organization of human, murine, and feline MHC class II region.

Authors:  Naoya Yuhki; Thomas Beck; Robert M Stephens; Yoko Nishigaki; Kymberly Newmann; Stephen J O'Brien
Journal:  Genome Res       Date:  2003-05-12       Impact factor: 9.043

4.  A 1463 gene cattle-human comparative map with anchor points defined by human genome sequence coordinates.

Authors:  Annelie Everts-van der Wind; Srinivas R Kata; Mark R Band; Mark Rebeiz; Denis M Larkin; Robin E Everts; Cheryl A Green; Lei Liu; Shreedhar Natarajan; Tom Goldammer; Jun Heon Lee; Stephanie McKay; James E Womack; Harris A Lewin
Journal:  Genome Res       Date:  2004-07       Impact factor: 9.043

5.  Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution.

Authors:  Pavel Pevzner; Glenn Tesler
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-16       Impact factor: 11.205

6.  High-density rat radiation hybrid maps containing over 24,000 SSLPs, genes, and ESTs provide a direct link to the rat genome sequence.

Authors:  Anne E Kwitek; Jo Gullings-Handley; Jiaming Yu; Danilo C Carlos; Kimberly Orlebeke; Jeff Nie; Jeffrey Eckert; Angela Lemke; Jaime Wendt Andrae; Susan Bromberg; Dean Pasko; Dan Chen; Todd E Scheetz; Thomas L Casavant; M Bento Soares; Val C Sheffield; Peter J Tonellato; Howard J Jacob
Journal:  Genome Res       Date:  2004-04       Impact factor: 9.043

7.  A cattle-human comparative map built with cattle BAC-ends and human genome sequence.

Authors:  Denis M Larkin; Annelie Everts-van der Wind; Mark Rebeiz; Peter A Schweitzer; Sharon Bachman; Cheryl Green; Chris L Wright; Edhilvia J Campos; Leslie D Benson; Jennifer Edwards; Lei Liu; Kazutoyo Osoegawa; James E Womack; Pieter J de Jong; Harris A Lewin
Journal:  Genome Res       Date:  2003-08       Impact factor: 9.043

8.  Gene synteny comparisons between different vertebrates provide new insights into breakage and fusion events during mammalian karyotype evolution.

Authors:  Claus Kemkemer; Matthias Kohn; David N Cooper; Lutz Froenicke; Josef Högel; Horst Hameister; Hildegard Kehrer-Sawatzki
Journal:  BMC Evol Biol       Date:  2009-04-24       Impact factor: 3.260

9.  Hotspots of mammalian chromosomal evolution.

Authors:  Jeffrey A Bailey; Robert Baertsch; W James Kent; David Haussler; Evan E Eichler
Journal:  Genome Biol       Date:  2004-03-08       Impact factor: 13.583

10.  An integrated 4249 marker FISH/RH map of the canine genome.

Authors:  Matthew Breen; Christophe Hitte; Travis D Lorentzen; Rachael Thomas; Edouard Cadieu; Leah Sabacan; Allyson Scott; Gwenaelle Evanno; Heidi G Parker; Ewen F Kirkness; Ruth Hudson; Richard Guyon; Gregory G Mahairas; Boris Gelfenbeyn; Claire M Fraser; Catherine André; Francis Galibert; Elaine A Ostrander
Journal:  BMC Genomics       Date:  2004-09-13       Impact factor: 3.969

View more
  83 in total

1.  A high-resolution 15,000(Rad) radiation hybrid panel for the domestic cat.

Authors:  L H Bach; B Gandolfi; J C Grahn; L V Millon; M S Kent; K Narfstrom; S A Cole; J C Mullikin; R A Grahn; L A Lyons
Journal:  Cytogenet Genome Res       Date:  2012-07-06       Impact factor: 1.636

2.  Reconstruction and evolutionary history of eutherian chromosomes.

Authors:  Jaebum Kim; Marta Farré; Loretta Auvil; Boris Capitanu; Denis M Larkin; Jian Ma; Harris A Lewin
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-19       Impact factor: 11.205

3.  The Global Invertebrate Genomics Alliance (GIGA): developing community resources to study diverse invertebrate genomes.

Authors:  Heather Bracken-Grissom; Allen G Collins; Timothy Collins; Keith Crandall; Daniel Distel; Casey Dunn; Gonzalo Giribet; Steven Haddock; Nancy Knowlton; Mark Martindale; Mónica Medina; Charles Messing; Stephen J O'Brien; Gustav Paulay; Nicolas Putnam; Timothy Ravasi; Greg W Rouse; Joseph F Ryan; Anja Schulze; Gert Wörheide; Maja Adamska; Xavier Bailly; Jesse Breinholt; William E Browne; M Christina Diaz; Nathaniel Evans; Jean-François Flot; Nicole Fogarty; Matthew Johnston; Bishoy Kamel; Akito Y Kawahara; Tammy Laberge; Dennis Lavrov; François Michonneau; Leonid L Moroz; Todd Oakley; Karen Osborne; Shirley A Pomponi; Adelaide Rhodes; Scott R Santos; Nori Satoh; Robert W Thacker; Yves Van de Peer; Christian R Voolstra; David Mark Welch; Judith Winston; Xin Zhou
Journal:  J Hered       Date:  2014 Jan-Feb       Impact factor: 2.645

Review 4.  The Genome 10K Project: a way forward.

Authors:  Klaus-Peter Koepfli; Benedict Paten; Stephen J O'Brien
Journal:  Annu Rev Anim Biosci       Date:  2015       Impact factor: 8.923

5.  Novel tools for characterising inter and intra chromosomal rearrangements in avian microchromosomes.

Authors:  Pamela E Lithgow; Rebecca O'Connor; Deborah Smith; Gothami Fonseka; Abdullah Al Mutery; Claudia Rathje; Richard Frodsham; Patricia O'Brien; Fumio Kasai; Malcolm A Ferguson-Smith; Benjamin M Skinner; Darren K Griffin
Journal:  Chromosome Res       Date:  2014-04       Impact factor: 5.239

6.  Rat mir-155 generated from the lncRNA Bic is 'hidden' in the alternate genomic assembly and reveals the existence of novel mammalian miRNAs and clusters.

Authors:  Paolo Uva; Letizia Da Sacco; Manuela Del Cornò; Antonella Baldassarre; Paola Sestili; Massimiliano Orsini; Alessia Palma; Sandra Gessani; Andrea Masotti
Journal:  RNA       Date:  2013-01-17       Impact factor: 4.942

7.  BAC-HAPPY mapping (BAP mapping): a new and efficient protocol for physical mapping.

Authors:  Giang T H Vu; Paul H Dear; Peter D S Caligari; Mike J Wilkinson
Journal:  PLoS One       Date:  2010-02-08       Impact factor: 3.240

8.  Assignment of chromosomal locations for unassigned SNPs/scaffolds based on pair-wise linkage disequilibrium estimates.

Authors:  Mehar S Khatkar; Matthew Hobbs; Markus Neuditschko; Johann Sölkner; Frank W Nicholas; Herman W Raadsma
Journal:  BMC Bioinformatics       Date:  2010-04-07       Impact factor: 3.169

9.  A Molecular Cytogenetic Map of Scallop (Patinopecten yessoensis).

Authors:  Zujing Yang; Xuan Li; Huan Liao; Liping Hu; Cheng Peng; Shenhai Wang; Xiaoting Huang; Zhenmin Bao
Journal:  Mar Biotechnol (NY)       Date:  2019-08-31       Impact factor: 3.619

Review 10.  Genome-wide scans for footprints of natural selection.

Authors:  Taras K Oleksyk; Michael W Smith; Stephen J O'Brien
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-01-12       Impact factor: 6.237

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.