Literature DB >> 11575724

A library of Arabidopsis 35S-cDNA lines for identifying novel mutants.

S LeClere1, B Bartel.   

Abstract

We have developed a system to over-express or co-suppress random cDNAs in Arabidopsis thaliana upon Agrobacterium tumefaciens-mediated transformation. We constructed a binary vector containing a novel Arabidopsis cDNA library driven by the cauliflower mosaic virus (CaMV) 35S promoter. The vector, 35SpBARN, offers in terra selection with glufosinate ammonium (BASTA) and the ability to identify the cDNA insert using PCR with flanking primers. We introduced this overexpression library into Arabidopsis and selected over 30,000 transformants. A random sample of 50 T1 plants was analyzed to determine the quality of the cDNA library in planta. About 90% of T1 plants in the collection have inserts, the average insert size is ca. 1.1 kb, and ca. 43% of these inserts appear to encode full-length proteins. T1 plants were screened for visible abnormalities, and one mutant, V5, was chosen for further study. This mutant displays a pale green phenotype, and its transgene contains a partial petH cDNA encoding chloroplast ferredoxin-NADP+ reductase (EC 1.18.1.2). This construct co-suppresses the endogenous petH transcript. We recapitulated the mutant phenotype by expressing either the full-length or truncated petH cDNA from the CaMV 35S promoter in wild-type Arabidopsis. Our results indicate that co-suppressing endogenous genes can cause dominant phenotypes as expected. As we have also used the 35SpBARN vector to successfully over-express other transcripts in planta, we predict that this system will be generally useful for identifying genes that yield phenotypes upon over-expression as well.

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Year:  2001        PMID: 11575724     DOI: 10.1023/a:1011699722052

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  31 in total

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Journal:  Plant J       Date:  1997-10       Impact factor: 6.417

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Authors:  G M Church; W Gilbert
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8.  FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis.

Authors:  D C Nelson; J Lasswell; L E Rogg; M A Cohen; B Bartel
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9.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

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Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

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  34 in total

Review 1.  Reverse genetic approaches for functional genomics of rice.

Authors:  Gynheung An; Dong-Hoon Jeong; Ki-Hong Jung; Sichul Lee
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2.  pex5 Mutants that differentially disrupt PTS1 and PTS2 peroxisomal matrix protein import in Arabidopsis.

Authors:  Bibi Rafeiza Khan; Bethany K Zolman
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3.  IBR3, a novel peroxisomal acyl-CoA dehydrogenase-like protein required for indole-3-butyric acid response.

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Journal:  Plant Mol Biol       Date:  2007-02-03       Impact factor: 4.076

4.  The protein phosphatase AtPP2CA negatively regulates abscisic acid signal transduction in Arabidopsis, and effects of abh1 on AtPP2CA mRNA.

Authors:  Josef M Kuhn; Aurélien Boisson-Dernier; Marie B Dizon; Mohammad H Maktabi; Julian I Schroeder
Journal:  Plant Physiol       Date:  2005-12-16       Impact factor: 8.340

5.  An Arabidopsis basic helix-loop-helix leucine zipper protein modulates metal homeostasis and auxin conjugate responsiveness.

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6.  Over-expression of an AT-hook gene, AHL22, delays flowering and inhibits the elongation of the hypocotyl in Arabidopsis thaliana.

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Journal:  Plant Mol Biol       Date:  2009-06-11       Impact factor: 4.076

7.  Interdependence of the peroxisome-targeting receptors in Arabidopsis thaliana: PEX7 facilitates PEX5 accumulation and import of PTS1 cargo into peroxisomes.

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8.  Higher plant calreticulins have acquired specialized functions in Arabidopsis.

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