Literature DB >> 11574561

Quantification of Candida albicans actin mRNA by the LightCycler system as a means of assessing viability in a model of cutaneous candidiasis.

C N Okeke1, R Tsuboi, H Ogawa.   

Abstract

The LightCycler system (two-step reverse transcription-PCR-fluorescent hybridization [LC RT-PCR-FH]) was used to quantify Candida albicans actin mRNA as a means of assessing its viability in a reconstituted skin model of cutaneous candidiasis following the application of an antimycotic. A 192-bp ACT exon fragment was ligated into the pCR2.1 plasmid vector, and dilutions of the cloned insert (pACT; 4.092 kb) were used as the standard reference template. The LC RT-PCR-FH system could detect 1 fg of pACT, equivalent to 2.2 copies of the plasmid. The ACT exon-based PCR primers and FH probes were C. albicans specific, and electrophoretic analysis of the LC RT-PCR-FH assay product showed a 174-bp band in agarose gel. The number of copies of C. albicans ACT mRNA per milligram of tissue decreased with increasing amounts of amorolfine applied to a C. albicans-infected skin model, showing a reduction in viability. Detection and quantification of ACT mRNA in tissue by the LC RT-PCR-FH assay corresponded with cultural isolation of C. albicans from samples. The ACT mRNA-targeted LC RT-PCR-FH assay represents a sensitive, specific, rapid, and quantitative means of assessing the viability of C. albicans in infected tissue. This method may also be useful in evaluating the therapeutic efficacies of antifungal drugs in the treatment of various forms of candidiasis and other fungal diseases.

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Year:  2001        PMID: 11574561      PMCID: PMC88377          DOI: 10.1128/JCM.39.10.3491-3494.2001

Source DB:  PubMed          Journal:  J Clin Microbiol        ISSN: 0095-1137            Impact factor:   5.948


  17 in total

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Authors:  J Loeffler; N Henke; H Hebart; D Schmidt; L Hagmeyer; U Schumacher; H Einsele
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2.  The effects of amorolfine and oxiconazole on the ultrastructure of Trichophyton mentagrophytes. A comparison.

Authors:  W Melchinger; A Polak; J Müller
Journal:  Mycoses       Date:  1990 Jul-Aug       Impact factor: 4.377

3.  Tissue-dependent plastid RNA splicing in maize: transcripts from four plastid genes are predominantly unspliced in leaf meristems and roots.

Authors:  A Barkan
Journal:  Plant Cell       Date:  1989-04       Impact factor: 11.277

4.  Reverse transcription - 3' rapid amplification of cDNA ends-nested PCR of ACT1 and SAP2 mRNA as a means of detecting viable Candida albicans in an in vitro cutaneous candidiasis model.

Authors:  C N Okeke; R Tsuboi; M Kawai; M Yamazaki; S Reangchainam; H Ogawa
Journal:  J Invest Dermatol       Date:  2000-01       Impact factor: 8.551

Review 5.  Actin molecular structure and function.

Authors:  E Reisler
Journal:  Curr Opin Cell Biol       Date:  1993-02       Impact factor: 8.382

Review 6.  Molecular genetics of actin function.

Authors:  E S Hennessey; D R Drummond; J C Sparrow
Journal:  Biochem J       Date:  1993-05-01       Impact factor: 3.857

7.  Development and evaluation of a molecular viability assay for Pneumocystis carinii.

Authors:  N Maher; S Vermund; M Lasbury; C Lee; M Bartlett; T R Unnasch
Journal:  J Clin Microbiol       Date:  2000-05       Impact factor: 5.948

8.  Rapid identification of Yersinia enterocolitica in blood by the 5' nuclease PCR assay.

Authors:  K Sen
Journal:  J Clin Microbiol       Date:  2000-05       Impact factor: 5.948

9.  Phylogenetic analysis and rapid identification of Candida dubliniensis based on analysis of ACT1 intron and exon sequences.

Authors:  Samantha M Donnelly; Derek J Sullivan; Diarmuid B Shanley; David C Coleman
Journal:  Microbiology       Date:  1999-08       Impact factor: 2.777

10.  Polymerase chain reaction for the diagnosis of candidemia.

Authors:  V L Kan
Journal:  J Infect Dis       Date:  1993-09       Impact factor: 5.226

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  6 in total

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Authors:  Joao P Frade; David W Warnock; Beth A Arthington-Skaggs
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Review 2.  Real-time PCR in clinical microbiology: applications for routine laboratory testing.

Authors:  M J Espy; J R Uhl; L M Sloan; S P Buckwalter; M F Jones; E A Vetter; J D C Yao; N L Wengenack; J E Rosenblatt; F R Cockerill; T F Smith
Journal:  Clin Microbiol Rev       Date:  2006-01       Impact factor: 26.132

3.  Gene expression in HL60 granulocytoids and human polymorphonuclear leukocytes exposed to Candida albicans.

Authors:  Alaka Mullick; Miria Elias; Penelope Harakidas; Anne Marcil; Malcolm Whiteway; Bing Ge; Thomas J Hudson; Antoine W Caron; Lucie Bourget; Serge Picard; Orce Jovcevski; Bernard Massie; David Y Thomas
Journal:  Infect Immun       Date:  2004-01       Impact factor: 3.441

4.  Detection of Candida albicans mRNA in archival histopathology samples by reverse transcription-PCR.

Authors:  Kyle T Beggs; Ann R Holmes; Richard D Cannon; Alison M Rich
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5.  Low-level pilin expression allows for substantial DNA transformation competence in Neisseria gonorrhoeae.

Authors:  Cynthia D Long; Deborah M Tobiason; Matthew P Lazio; Kimberly A Kline; H Steven Seifert
Journal:  Infect Immun       Date:  2003-11       Impact factor: 3.441

6.  A real-time semi-quantitative RT-PCR assay demonstrates that the pilE sequence dictates the frequency and characteristics of pilin antigenic variation in Neisseria gonorrhoeae.

Authors:  Melissa S Rohrer; Matthew P Lazio; H Steven Seifert
Journal:  Nucleic Acids Res       Date:  2005-06-09       Impact factor: 16.971

  6 in total

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