Literature DB >> 11574484

Structure and function of the N-terminal 40 kDa fragment of human PMS2: a monomeric GHL ATPase.

A Guarné1, M S Junop, W Yang.   

Abstract

Human MutLalpha, a heterodimer of hMLH1 and hPMS2, is essential for DNA mismatch repair. Inactivation of the hmlh1 or hpms2 genes by mutation or epigenesis causes genomic instability and a predisposition to hereditary non-polyposis cancer. We report here the X-ray crystal structures of the conserved N-terminal 40 kDa fragment of hPMS2, NhPMS2, and its complexes with ATPgammaS and ADP at 1.95, 2.7 and 2.7 A resolution, respectively. The NhPMS2 structures closely resemble the ATPase fragment of Escherichia coli MutL, which coordinates protein-protein interactions in mismatch repair by undergoing structural transformation upon binding of ATP. Unlike the E.coli MutL, whose ATPase activity requires protein dimerization, the monomeric form of NhPMS2 is active both in ATP hydrolysis and DNA binding. NhPMS2 is the first example of a GHL ATPase active as a monomer, suggesting that its activity may be modulated by hMLH1 in MutLalpha, and vice versa. The potential heterodimer interface revealed by crystallography provides a mutagenesis target for functional studies of MutLalpha.

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Year:  2001        PMID: 11574484      PMCID: PMC125661          DOI: 10.1093/emboj/20.19.5521

Source DB:  PubMed          Journal:  EMBO J        ISSN: 0261-4189            Impact factor:   11.598


  38 in total

1.  Composite active site of an ABC ATPase: MutS uses ATP to verify mismatch recognition and authorize DNA repair.

Authors:  M S Junop; G Obmolova; K Rausch; P Hsieh; W Yang
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

2.  Functional studies on the candidate ATPase domains of Saccharomyces cerevisiae MutLalpha.

Authors:  P T Tran; R M Liskay
Journal:  Mol Cell Biol       Date:  2000-09       Impact factor: 4.272

3.  The DNA binding properties of the MutL protein isolated from Escherichia coli.

Authors:  S M Bende; R H Grafström
Journal:  Nucleic Acids Res       Date:  1991-04-11       Impact factor: 16.971

4.  Crystal structure and ATPase activity of MutL: implications for DNA repair and mutagenesis.

Authors:  C Ban; W Yang
Journal:  Cell       Date:  1998-11-13       Impact factor: 41.582

Review 5.  Biochemistry and genetics of eukaryotic mismatch repair.

Authors:  R Kolodner
Journal:  Genes Dev       Date:  1996-06-15       Impact factor: 11.361

6.  Cloning, characterization and chromosomal assignment of the human genes homologous to yeast PMS1, a member of mismatch repair genes.

Authors:  A Horii; H J Han; S Sasaki; M Shimada; Y Nakamura
Journal:  Biochem Biophys Res Commun       Date:  1994-11-15       Impact factor: 3.575

7.  Functional domains of the Saccharomyces cerevisiae Mlh1p and Pms1p DNA mismatch repair proteins and their relevance to human hereditary nonpolyposis colorectal cancer-associated mutations.

Authors:  Q Pang; T A Prolla; R M Liskay
Journal:  Mol Cell Biol       Date:  1997-08       Impact factor: 4.272

Review 8.  Identification of mismatch repair genes and their role in the development of cancer.

Authors:  R Fishel; R D Kolodner
Journal:  Curr Opin Genet Dev       Date:  1995-06       Impact factor: 5.578

9.  Automated MAD and MIR structure solution.

Authors:  T C Terwilliger; J Berendzen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1999-04

10.  Selenomethionyl proteins produced for analysis by multiwavelength anomalous diffraction (MAD): a vehicle for direct determination of three-dimensional structure.

Authors:  W A Hendrickson; J R Horton; D M LeMaster
Journal:  EMBO J       Date:  1990-05       Impact factor: 11.598

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  49 in total

1.  Mismatch recognition-coupled stabilization of Msh2-Msh6 in an ATP-bound state at the initiation of DNA repair.

Authors:  Edwin Antony; Manju M Hingorani
Journal:  Biochemistry       Date:  2003-07-01       Impact factor: 3.162

2.  Evidence for ATP-dependent structural rearrangement of nuclease catalytic site in DNA mismatch repair endonuclease MutL.

Authors:  Tatsuya Yamamoto; Hitoshi Iino; Kwang Kim; Seiki Kuramitsu; Kenji Fukui
Journal:  J Biol Chem       Date:  2011-09-26       Impact factor: 5.157

3.  Human PMS2 gene family: origin, molecular evolution, and biological implications.

Authors:  D G Shpakovskii; E K Shematorova; G V Shpakovskii
Journal:  Dokl Biochem Biophys       Date:  2006 May-Jun       Impact factor: 0.788

4.  Structure of the MutLα C-terminal domain reveals how Mlh1 contributes to Pms1 endonuclease site.

Authors:  Emeric Gueneau; Claudine Dherin; Pierre Legrand; Carine Tellier-Lebegue; Bernard Gilquin; Pierre Bonnesoeur; Floriana Londino; Cathy Quemener; Marie-Hélene Le Du; Josan A Márquez; Mireille Moutiez; Muriel Gondry; Serge Boiteux; Jean-Baptiste Charbonnier
Journal:  Nat Struct Mol Biol       Date:  2013-02-24       Impact factor: 15.369

5.  Small-angle X-ray scattering analysis reveals the ATP-bound monomeric state of the ATPase domain from the homodimeric MutL endonuclease, a GHKL phosphotransferase superfamily protein.

Authors:  Hitoshi Iino; Takaaki Hikima; Yuya Nishida; Masaki Yamamoto; Seiki Kuramitsu; Kenji Fukui
Journal:  Extremophiles       Date:  2015-03-26       Impact factor: 2.395

6.  Functional analysis of rare variants in mismatch repair proteins augments results from computation-based predictive methods.

Authors:  Sanjeevani Arora; Peter J Huwe; Rahmat Sikder; Manali Shah; Amanda J Browne; Randy Lesh; Emmanuelle Nicolas; Sanat Deshpande; Michael J Hall; Roland L Dunbrack; Erica A Golemis
Journal:  Cancer Biol Ther       Date:  2017-05-11       Impact factor: 4.742

Review 7.  DNA repair mechanisms and the bypass of DNA damage in Saccharomyces cerevisiae.

Authors:  Serge Boiteux; Sue Jinks-Robertson
Journal:  Genetics       Date:  2013-04       Impact factor: 4.562

8.  DNA binding by yeast Mlh1 and Pms1: implications for DNA mismatch repair.

Authors:  Mark C Hall; Polina V Shcherbakova; John M Fortune; Christoph H Borchers; J Michael Dial; Kenneth B Tomer; Thomas A Kunkel
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

9.  Residues in the N-terminal domain of MutL required for mismatch repair in Bacillus subtilis.

Authors:  Nicholas J Bolz; Justin S Lenhart; Steven C Weindorf; Lyle A Simmons
Journal:  J Bacteriol       Date:  2012-07-27       Impact factor: 3.490

10.  Direct visualization of asymmetric adenine-nucleotide-induced conformational changes in MutL alpha.

Authors:  Elizabeth J Sacho; Farid A Kadyrov; Paul Modrich; Thomas A Kunkel; Dorothy A Erie
Journal:  Mol Cell       Date:  2008-01-18       Impact factor: 17.970

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