Literature DB >> 11562499

Crystal structure of human PEDF, a potent anti-angiogenic and neurite growth-promoting factor.

M Simonovic1, P G Gettins, K Volz.   

Abstract

Pigment epithelium-derived factor (PEDF), a noninhibitory member of the serpin superfamily, is the most potent inhibitor of angiogenesis in the mammalian ocular compartment. It also has neurotrophic activity, both in the retina and in the central nervous system, and is highly up-regulated in young versus senescent fibroblasts. To provide a structural basis for understanding its many biological roles, we have solved the crystal structure of glycosylated human PEDF to 2.85 A. The structure revealed the organization of possible receptor and heparin-binding sites, and showed that, unlike any other previously characterized serpin, PEDF has a striking asymmetric charge distribution that might be of functional importance. These results provide a starting point for future detailed structure/function analyses into possible mechanisms of PEDF action that could lead to development of therapeutics against uncontrolled angiogenesis.

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Year:  2001        PMID: 11562499      PMCID: PMC58695          DOI: 10.1073/pnas.211268598

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  32 in total

1.  PEDF: Raising both hopes and questions in controlling angiogenesis.

Authors:  G J Chader
Journal:  Proc Natl Acad Sci U S A       Date:  2001-02-27       Impact factor: 11.205

2.  Neuronal differentiation of retinoblastoma cells induced by medium conditioned by human RPE cells.

Authors:  J Tombran-Tink; L V Johnson
Journal:  Invest Ophthalmol Vis Sci       Date:  1989-08       Impact factor: 4.799

3.  Protein folding and association: insights from the interfacial and thermodynamic properties of hydrocarbons.

Authors:  A Nicholls; K A Sharp; B Honig
Journal:  Proteins       Date:  1991

4.  PEDF: a pigment epithelium-derived factor with potent neuronal differentiative activity.

Authors:  J Tombran-Tink; G G Chader; L V Johnson
Journal:  Exp Eye Res       Date:  1991-09       Impact factor: 3.467

5.  Multiple sequence alignment with hierarchical clustering.

Authors:  F Corpet
Journal:  Nucleic Acids Res       Date:  1988-11-25       Impact factor: 16.971

Review 6.  Implications of the three-dimensional structure of alpha 1-antitrypsin for structure and function of serpins.

Authors:  R Huber; R W Carrell
Journal:  Biochemistry       Date:  1989-11-14       Impact factor: 3.162

7.  Pigment epithelium-derived factor supports normal development of photoreceptor neurons and opsin expression after retinal pigment epithelium removal.

Authors:  M M Jablonski; J Tombran-Tink; D A Mrazek; A Iannaccone
Journal:  J Neurosci       Date:  2000-10-01       Impact factor: 6.167

8.  Differentiation of Y79 retinoblastoma cells with pigment epithelial-derived factor and interphotoreceptor matrix wash: effects on tumorigenicity.

Authors:  G M Seigel; J Tombran-Tink; S P Becerra; G J Chader; D A Diloreto; C del Cerro; E S Lazar; M del Cerro
Journal:  Growth Factors       Date:  1994       Impact factor: 2.511

9.  Senescent WI-38 cells fail to express EPC-1, a gene induced in young cells upon entry into the G0 state.

Authors:  R J Pignolo; V J Cristofalo; M O Rotenberg
Journal:  J Biol Chem       Date:  1993-04-25       Impact factor: 5.157

10.  Spontaneous corneal neovascularization in nude mice. Local imbalance between angiogenic and anti-angiogenic factors.

Authors:  G M Kaminska; J Y Niederkorn
Journal:  Invest Ophthalmol Vis Sci       Date:  1993-01       Impact factor: 4.799

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  39 in total

Review 1.  Emerging therapeutic approaches in the management of retinal angiogenesis and edema.

Authors:  An Truong; Tien Y Wong; Levon M Khachigian
Journal:  J Mol Med (Berl)       Date:  2010-12-18       Impact factor: 4.599

2.  A Role for Low-Density Lipoprotein Receptor-Related Protein 6 in Blood Vessel Regression in Wound Healing.

Authors:  Elizabeth R Michalczyk; Lin Chen; Mariana B Maia; Luisa A DiPietro
Journal:  Adv Wound Care (New Rochelle)       Date:  2019-12-06       Impact factor: 4.730

3.  Pigment epithelium-derived factor binds to hyaluronan. Mapping of a hyaluronan binding site.

Authors:  S Patricia Becerra; L Alberto Perez-Mediavilla; John E Weldon; Silvia Locatelli-Hoops; Preenie Senanayake; Luigi Notari; Vicente Notario; Joe G Hollyfield
Journal:  J Biol Chem       Date:  2008-09-19       Impact factor: 5.157

4.  Expression and purification of functional epitope of pigment epithelium-derived factor in E. coli with inhibiting effect on endothelial cells.

Authors:  Qing Gong; Xia Yang; Weibin Cai; Guoquan Gao; Zhonghan Yang
Journal:  Protein J       Date:  2010-04       Impact factor: 2.371

5.  Multiple origins of green coloration in frogs mediated by a novel biliverdin-binding serpin.

Authors:  Carlos Taboada; Andrés E Brunetti; Mariana L Lyra; Robert R Fitak; Ana Faigón Soverna; Santiago R Ron; María G Lagorio; Célio F B Haddad; Norberto P Lopes; Sönke Johnsen; Julián Faivovich; Lucía B Chemes; Sara E Bari
Journal:  Proc Natl Acad Sci U S A       Date:  2020-07-13       Impact factor: 11.205

6.  Spatiotemporal regulation of PEDF signaling by type I collagen remodeling.

Authors:  Kazuki Kawahara; Takuya Yoshida; Takahiro Maruno; Hiroya Oki; Tadayasu Ohkubo; Takaki Koide; Yuji Kobayashi
Journal:  Proc Natl Acad Sci U S A       Date:  2020-05-08       Impact factor: 11.205

7.  Pigment epithelium-derived factor (PEDF) shares binding sites in collagen with heparin/heparan sulfate proteoglycans.

Authors:  Atsushi Sekiya; Hitomi Okano-Kosugi; Chisato M Yamazaki; Takaki Koide
Journal:  J Biol Chem       Date:  2011-06-07       Impact factor: 5.157

8.  Pigment-epithelium-derived factor (PEDF) occurs at a physiologically relevant concentration in human blood: purification and characterization.

Authors:  Steen V Petersen; Zuzana Valnickova; Jan J Enghild
Journal:  Biochem J       Date:  2003-08-15       Impact factor: 3.857

9.  Codon preference optimization increases heterologous PEDF expression.

Authors:  Anzor G Gvritishvili; Kar Wah Leung; Joyce Tombran-Tink
Journal:  PLoS One       Date:  2010-11-30       Impact factor: 3.240

Review 10.  The effects of PEDF on cancer biology: mechanisms of action and therapeutic potential.

Authors:  S Patricia Becerra; Vicente Notario
Journal:  Nat Rev Cancer       Date:  2013-03-14       Impact factor: 60.716

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