Literature DB >> 11545438

Introns of Entamoeba histolytica and Entamoeba dispar.

U Wilihoeft1, E Campos-Góngora, S Touzni, I Bruchhaus, E Tannich.   

Abstract

The genome of Entamoeba histolytica is considered to possess very few intervening sequences (introns), as only 5 intron-containing genes from this protozoan parasite have been reported so far. However, while sequencing a number of genomic contigs as well as three independent genes coding for ribosomal protein L27a, we have identified 9 additional intron-containing genes of E. histolytica and the closely related species Entamoeba dispar, indicating that introns are more common in these organisms than previously suggested. The various amoeba introns are relatively short comprising between 46 and 115 nucleotides only and have a higher AT-content compared to the corresponding exon sequences. In contrast to higher eukaryotes, amoeba introns do not contain a well-conserved branch point consensus, and have extended donor and acceptor splice sites of the sequences G

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Year:  2001        PMID: 11545438     DOI: 10.1078/1434-4610-00053

Source DB:  PubMed          Journal:  Protist        ISSN: 1434-4610


  15 in total

1.  Spliceosomal introns in a deep-branching eukaryote: the splice of life.

Authors:  Patricia J Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-03-19       Impact factor: 11.205

2.  Coding and noncoding genomic regions of Entamoeba histolytica have significantly different rates of sequence polymorphisms: implications for epidemiological studies.

Authors:  Dhruva Bhattacharya; Rashidul Haque; Upinder Singh
Journal:  J Clin Microbiol       Date:  2005-09       Impact factor: 5.948

3.  A method for construction, cloning and expression of intron-less gene from unannotated genomic DNA.

Authors:  Vineet Agrawal; Bharti Gupta; Uttam Chand Banerjee; Nilanjan Roy
Journal:  Mol Biotechnol       Date:  2008-06-10       Impact factor: 2.695

4.  Spliceosomal introns in the deep-branching eukaryote Trichomonas vaginalis.

Authors:  Stepánka Vanácová; Weihong Yan; Jane M Carlton; Patricia J Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-11       Impact factor: 11.205

5.  The abundant polyadenylated transcript 2 DNA sequence of the pathogenic protozoan parasite Entamoeba histolytica represents a nonautonomous non-long-terminal-repeat retrotransposon-like element which is absent in the closely related nonpathogenic species Entamoeba dispar.

Authors:  Ute Willhoeft; Heidrun Buss; Egbert Tannich
Journal:  Infect Immun       Date:  2002-12       Impact factor: 3.441

6.  A spliceosomal intron in Giardia lamblia.

Authors:  Julie E J Nixon; Amy Wang; Hilary G Morrison; Andrew G McArthur; Mitchell L Sogin; Brendan J Loftus; John Samuelson
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-19       Impact factor: 11.205

7.  The intestinal protozoan parasite Entamoeba histolytica contains 20 cysteine protease genes, of which only a small subset is expressed during in vitro cultivation.

Authors:  Iris Bruchhaus; Brendan J Loftus; Neil Hall; Egbert Tannich
Journal:  Eukaryot Cell       Date:  2003-06

8.  The essentials of protein import in the degenerate mitochondrion of Entamoeba histolytica.

Authors:  Pavel Dolezal; Michael J Dagley; Maya Kono; Peter Wolynec; Vladimir A Likić; Jung Hock Foo; Miroslava Sedinová; Jan Tachezy; Anna Bachmann; Iris Bruchhaus; Trevor Lithgow
Journal:  PLoS Pathog       Date:  2010-03-19       Impact factor: 6.823

9.  Functional characterization of spliceosomal introns and identification of U2, U4, and U5 snRNAs in the deep-branching eukaryote Entamoeba histolytica.

Authors:  Carrie A Davis; Michael P S Brown; Upinder Singh
Journal:  Eukaryot Cell       Date:  2007-04-27

10.  Characterization of cytosine methylated regions and 5-cytosine DNA methyltransferase (Ehmeth) in the protozoan parasite Entamoeba histolytica.

Authors:  Ohad Fisher; Rama Siman-Tov; Serge Ankri
Journal:  Nucleic Acids Res       Date:  2004-01-09       Impact factor: 16.971

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