Literature DB >> 11536857

Catalysis of dialanine formation by glycine in the salt-induced peptide formation reaction.

Y Suwannachot1, B M Rode.   

Abstract

Mutual catalysis of amino acids in the salt-induced peptide formation (SIPF) reaction is demonstrated for the case of glycine/alanine. The presence of glycine enhances dialanine formation by a factor up to 50 and enables dialanine formation at much lower alanine concentrations. The actual amounts of glycine play an important role for this catalytic effect, the optimal glycine concentration is 1/8 of the alanine concentration. The mechanism appears to be based on the formation of the intermediate Gly-Ala-Ala tripeptide, connected to one coordination site of copper(II) ion, and subsequent hydrolysis to dialanine and glycine.

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Year:  1998        PMID: 11536857     DOI: 10.1023/a:1006503928834

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  10 in total

1.  Investigations on the mechanism of the salt-induced peptide formation.

Authors:  M G Schwendinger; B M Rode
Journal:  Orig Life Evol Biosph       Date:  1992       Impact factor: 1.950

2.  Determination of amino acids in biological, pharmaceutical, plant and food samples by automated precolumn derivatization and high-performance liquid chromatography.

Authors:  R Schuster
Journal:  J Chromatogr       Date:  1988-10-14

3.  Peptide formation mediated by cyanate.

Authors:  J J Flores; J O Leckie
Journal:  Nature       Date:  1973-08-17       Impact factor: 49.962

4.  Peptide formation in the presence of linear or cyclic polyphosphates.

Authors:  J Rabinowitz; J Flores; R Kresbach; G Rogers
Journal:  Nature       Date:  1969-11-22       Impact factor: 49.962

5.  Synthesis of biologically pertinent peptides under possible primordial conditions.

Authors:  G Steinman; M N Cole
Journal:  Proc Natl Acad Sci U S A       Date:  1967-08       Impact factor: 11.205

6.  Peptide formation in the prebiotic era: thermal condensation of glycine in fluctuating clay environments.

Authors:  N Lahav; D White; S Chang
Journal:  Science       Date:  1978-07-07       Impact factor: 47.728

7.  Prebiotic condensation reactions in an aqueous medium: a review of condensing agents.

Authors:  J Hulshof; C Ponnamperuma
Journal:  Orig Life       Date:  1976-08

8.  Interaction between ATP, metal ions, glycine, and several minerals.

Authors:  J Rishpon; P J O'Hara; N Lahav; J G Lawless
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

9.  Evaporation cycle experiments--a simulation of salt-induced peptide synthesis under possible prebiotic conditions.

Authors:  S Saetia; K R Liedl; A H Eder; B M Rode
Journal:  Orig Life Evol Biosph       Date:  1993-06       Impact factor: 1.950

10.  Condensation of oligoglycines with trimeta- and tetrametaphosphate in aqueous solutions.

Authors:  J Yamanaka; K Inomata; Y Yamagata
Journal:  Orig Life Evol Biosph       Date:  1988       Impact factor: 1.950

  10 in total
  7 in total

1.  Mutual amino acid catalysis in salt-induced peptide formation supports this mechanism's role in prebiotic peptide evolution.

Authors:  Y Suwannachot; B M Rode
Journal:  Orig Life Evol Biosph       Date:  1999-10       Impact factor: 1.950

2.  Polymer GARD: computer simulation of covalent bond formation in reproducing molecular assemblies.

Authors:  Barak Shenhav; Arren Bar-Even; Ran Kafri; Doron Lancet
Journal:  Orig Life Evol Biosph       Date:  2005-04       Impact factor: 1.950

3.  Catalytically increased prebiotic peptide formation: ditryptophan, dilysine, and diserine.

Authors:  Kristof Plankensteiner; Hannes Reiner; Bernd M Rode
Journal:  Orig Life Evol Biosph       Date:  2005-10       Impact factor: 1.950

4.  Catalytic activities of [GADV]-peptides. Formation and establishment of [GADV]-protein world for the emergence of life.

Authors:  Takae Oba; Jun Fukushima; Masako Maruyama; Ryoko Iwamoto; Kenji Ikehara
Journal:  Orig Life Evol Biosph       Date:  2005-10       Impact factor: 1.950

5.  Glycine and diglycine as possible catalytic factors in the prebiotic evolution of peptides.

Authors:  Kristof Plankensteiner; Alessandro Righi; Bernd M Rode
Journal:  Orig Life Evol Biosph       Date:  2002-06       Impact factor: 1.950

6.  Peptide formation mechanism on montmorillonite under thermal conditions.

Authors:  Shigeshi Fuchida; Harue Masuda; Keiji Shinoda
Journal:  Orig Life Evol Biosph       Date:  2014-06-11       Impact factor: 1.950

Review 7.  Evolutionary Steps in the Emergence of Life Deduced from the Bottom-Up Approach and GADV Hypothesis (Top-Down Approach).

Authors:  Kenji Ikehara
Journal:  Life (Basel)       Date:  2016-01-26
  7 in total

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