Literature DB >> 11526339

LISA: an intranet-based flexible database for protein crystallography project management.

P W Haebel1, V L Arcus, E N Baker, P Metcalf.   

Abstract

The increase in the number of projects carried out in protein crystallography laboratories has emphasized the need for effective management of project information and data. To meet this need, a flexible web-accessible database for protein crystallography project management (LISA) has been developed using the open-source software MySQL and PHP4. The database contains information about all aspects of structure-determination projects, including primer and plasmid sequences, protein expression, purification and crystallization results, structure coordinate files and resultant publications. The database web pages include links to relevant servers and contain, in addition, tools for processing stored information. The software package is freely available.

Mesh:

Substances:

Year:  2001        PMID: 11526339     DOI: 10.1107/s0907444901009295

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  6 in total

1.  Laboratory scale structural genomics.

Authors:  Brent W Segelke; Johana Schafer; Matthew A Coleman; Tim P Lekin; Dominique Toppani; Krzysztof J Skowronek; Katherine A Kantardjieff; Bernhard Rupp
Journal:  J Struct Funct Genomics       Date:  2004

2.  Automation in biological crystallization.

Authors:  Patrick Shaw Stewart; Jochen Mueller-Dieckmann
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-05-28       Impact factor: 1.056

3.  Recording information on protein complexes in an information management system.

Authors:  Marc Savitsky; Jonathan M Diprose; Chris Morris; Susanne L Griffiths; Edward Daniel; Bill Lin; Susan Daenke; Benjamin Bishop; Christian Siebold; Keith S Wilson; Richard Blake; David I Stuart; Robert M Esnouf
Journal:  J Struct Biol       Date:  2011-05-14       Impact factor: 2.867

4.  The Protein Information Management System (PiMS): a generic tool for any structural biology research laboratory.

Authors:  Chris Morris; Anne Pajon; Susanne L Griffiths; Ed Daniel; Marc Savitsky; Bill Lin; Jonathan M Diprose; Alan Wilter da Silva; Katya Pilicheva; Peter Troshin; Johannes van Niekerk; Neil Isaacs; James Naismith; Colin Nave; Richard Blake; Keith S Wilson; David I Stuart; Kim Henrick; Robert M Esnouf
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

5.  Design and implementation of a generalized laboratory data model.

Authors:  Michael C Wendl; Scott Smith; Craig S Pohl; David J Dooling; Asif T Chinwalla; Kevin Crouse; Todd Hepler; Shin Leong; Lynn Carmichael; Mike Nhan; Benjamin J Oberkfell; Elaine R Mardis; LaDeana W Hillier; Richard K Wilson
Journal:  BMC Bioinformatics       Date:  2007-09-26       Impact factor: 3.169

6.  Efficient sample tracking with OpenLabFramework.

Authors:  Markus List; Steffen Schmidt; Jakub Trojnar; Jochen Thomas; Mads Thomassen; Torben A Kruse; Qihua Tan; Jan Baumbach; Jan Mollenhauer
Journal:  Sci Rep       Date:  2014-03-04       Impact factor: 4.379

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.