Literature DB >> 11525067

A new repetitive DNA sequence family in the olive (Olea europaea L.).

P Lorite1, M F García, J A Carrillo, T Palomeque.   

Abstract

Two families of repeated DNA sequences were cloned from Olea europaea ssp sativa cv. "Picual". The first repetitive DNA is organized in a tandem repeat of monomers of 178 bp. Sequencing of several clones showed that it is relatively A-T rich (54.49%) and possesses short direct and inverted subrepeats as well as some palindromic sequences. Comparison between the monomers revealed heterogeneity of the sequence primary structure. This repetitive DNA is present in several cultivars of olive cultivates. Comparison of sequences with other repetitive DNAs described in Olea europaea has been carried out. No significant similarity was found. All the obtained results suggest that this repetitive DNA described here is a new family of repetitive DNA. The second repetitive DNA is organized in a tandem repeat of monomers of 78 bp. This second family of repetitive DNA showed significant similarity with other repetitive DNAs previously described in Olea europaea. Their existence in new cultivars of olive is shown.

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Year:  2001        PMID: 11525067     DOI: 10.1111/j.1601-5223.2001.00073.x

Source DB:  PubMed          Journal:  Hereditas        ISSN: 0018-0661            Impact factor:   3.271


  5 in total

1.  Identification and characterisation of Short Interspersed Nuclear Elements in the olive tree (Olea europaea L.) genome.

Authors:  Elena Barghini; Flavia Mascagni; Lucia Natali; Tommaso Giordani; Andrea Cavallini
Journal:  Mol Genet Genomics       Date:  2016-10-06       Impact factor: 3.291

2.  Molecular and cytogenetic characterization of an AT-rich satellite DNA family in Urvillea chacoensis Hunz. (Paullinieae, Sapindaceae).

Authors:  Juan D Urdampilleta; Anete Pereira de Souza; Dilaine R S Schneider; André L L Vanzela; María S Ferrucci; Eliana R F Martins
Journal:  Genetica       Date:  2008-11-25       Impact factor: 1.082

3.  The Singular Evolution of Olea Genome Structure.

Authors:  Flavia Mascagni; Elena Barghini; Marilena Ceccarelli; Luciana Baldoni; Carlos Trapero; Concepción Muñoz Díez; Lucia Natali; Andrea Cavallini; Tommaso Giordani
Journal:  Front Plant Sci       Date:  2022-03-31       Impact factor: 5.753

4.  The peculiar landscape of repetitive sequences in the olive (Olea europaea L.) genome.

Authors:  Elena Barghini; Lucia Natali; Rosa Maria Cossu; Tommaso Giordani; Massimo Pindo; Federica Cattonaro; Simone Scalabrin; Riccardo Velasco; Michele Morgante; Andrea Cavallini
Journal:  Genome Biol Evol       Date:  2014-04       Impact factor: 3.416

5.  LTR retrotransposon dynamics in the evolution of the olive (Olea europaea) genome.

Authors:  Elena Barghini; Lucia Natali; Tommaso Giordani; Rosa Maria Cossu; Simone Scalabrin; Federica Cattonaro; Hana Šimková; Jan Vrána; Jaroslav Doležel; Michele Morgante; Andrea Cavallini
Journal:  DNA Res       Date:  2014-11-26       Impact factor: 4.458

  5 in total

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