Literature DB >> 11520001

Bacterial diversity in soil samples from two uranium waste piles as determined by rep-APD, RISA and 16S rDNA retrieval.

S Selenska-Pobell1, G Kampf, K Hemming, G Radeva, G Satchanska.   

Abstract

The bacterial diversity in two uranium waste piles was studied. Total DNA was recovered from a large number of soil samples collected from different sites and depths in the piles using two procedures for direct lysis. Significant differences in the bacterial composition of the samples were revealed by the use of rep-APD, RISA and 16S ARDREA. The 16S rDNA analyses showed that the uranium wastes were dominated by Acidithiobacillusferrooxidans and by several Pseudomonas species classified in the gamma-subdivision of the Proteobacteria. The three kinds of A. ferrooxidans 16S and IGS rDNA specific fragments that were found corresponded to the three phylogenetic groups recognised in this species. This microdiversity probably reflects the genetic adaptation of the uranium waste strains to different concentrations of heavy metals.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11520001     DOI: 10.1023/a:1010237711077

Source DB:  PubMed          Journal:  Antonie Van Leeuwenhoek        ISSN: 0003-6072            Impact factor:   2.271


  18 in total

1.  Diversity of microorganisms in Fe-As-rich acid mine drainage waters of Carnoulès, France.

Authors:  O Bruneel; R Duran; C Casiot; F Elbaz-Poulichet; J-C Personné
Journal:  Appl Environ Microbiol       Date:  2006-01       Impact factor: 4.792

2.  Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils.

Authors:  Naomi L Ward; Jean F Challacombe; Peter H Janssen; Bernard Henrissat; Pedro M Coutinho; Martin Wu; Gary Xie; Daniel H Haft; Michelle Sait; Jonathan Badger; Ravi D Barabote; Brent Bradley; Thomas S Brettin; Lauren M Brinkac; David Bruce; Todd Creasy; Sean C Daugherty; Tanja M Davidsen; Robert T DeBoy; J Chris Detter; Robert J Dodson; A Scott Durkin; Anuradha Ganapathy; Michelle Gwinn-Giglio; Cliff S Han; Hoda Khouri; Hajnalka Kiss; Sagar P Kothari; Ramana Madupu; Karen E Nelson; William C Nelson; Ian Paulsen; Kevin Penn; Qinghu Ren; M J Rosovitz; Jeremy D Selengut; Susmita Shrivastava; Steven A Sullivan; Roxanne Tapia; L Sue Thompson; Kisha L Watkins; Qi Yang; Chunhui Yu; Nikhat Zafar; Liwei Zhou; Cheryl R Kuske
Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

3.  Bacterial diversity and composition of an alkaline uranium mine tailings-water interface.

Authors:  Nurul H Khan; Viorica F Bondici; Prabhakara G Medihala; John R Lawrence; Gideon M Wolfaardt; Jeff Warner; Darren R Korber
Journal:  J Microbiol       Date:  2013-09-14       Impact factor: 3.422

4.  Bacterial Diversity in Bentonites, Engineered Barrier for Deep Geological Disposal of Radioactive Wastes.

Authors:  Margarita Lopez-Fernandez; Andrea Cherkouk; Ramiro Vilchez-Vargas; Ruy Jauregui; Dietmar Pieper; Nico Boon; Ivan Sanchez-Castro; Mohamed L Merroun
Journal:  Microb Ecol       Date:  2015-05-30       Impact factor: 4.552

5.  Diversity and functional profile of bacterial communities at Lancaster acid mine drainage dam, South Africa as revealed by 16S rRNA gene high-throughput sequencing analysis.

Authors:  Thabile Lukhele; Ramganesh Selvarajan; Hlengilizwe Nyoni; Bheki Brilliance Mamba; Titus Alfred Makudali Msagati
Journal:  Extremophiles       Date:  2019-09-13       Impact factor: 2.395

6.  Au-Interaction of Slp1 Polymers and Monolayer from Lysinibacillus sphaericus JG-B53 - QCM-D, ICP-MS and AFM as Tools for Biomolecule-metal Studies.

Authors:  Matthias Suhr; Johannes Raff; Katrin Pollmann
Journal:  J Vis Exp       Date:  2016-01-19       Impact factor: 1.355

7.  Microbial diversity in sediments of saline Qinghai Lake, China: linking geochemical controls to microbial ecology.

Authors:  Hailiang Dong; Gengxin Zhang; Hongchen Jiang; Bingsong Yu; Leah R Chapman; Courtney R Lucas; Matthew W Fields
Journal:  Microb Ecol       Date:  2006-01-13       Impact factor: 4.552

8.  Nitrate-Utilizing Microorganisms Resistant to Multiple Metals from the Heavily Contaminated Oak Ridge Reservation.

Authors:  Michael P Thorgersen; Xiaoxuan Ge; Farris L Poole; Morgan N Price; Adam P Arkin; Michael W W Adams
Journal:  Appl Environ Microbiol       Date:  2019-08-14       Impact factor: 4.792

9.  Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation.

Authors:  Maria V Brennerova; Jirina Josefiova; Vladimir Brenner; Dietmar H Pieper; Howard Junca
Journal:  Environ Microbiol       Date:  2009-02-19       Impact factor: 5.491

10.  Eukaryotic life in biofilms formed in a uranium mine.

Authors:  Isabel Zirnstein; Thuro Arnold; Evelyn Krawczyk-Bärsch; Ulf Jenk; Gert Bernhard; Isolde Röske
Journal:  Microbiologyopen       Date:  2012-06       Impact factor: 3.139

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.