Literature DB >> 11483982

Strategies for the systematic sequencing of complex genomes.

E D Green1.   

Abstract

Recent spectacular advances in the technologies and strategies for DNA sequencing have profoundly accelerated the detailed analysis of genomes from myriad organisms. The past few years alone have seen the publication of near-complete or draft versions of the genome sequence of several well-studied, multicellular organisms - most notably, the human. As well as providing data of fundamental biological significance, these landmark accomplishments have yielded important strategic insights that are guiding current and future genome-sequencing projects.

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Year:  2001        PMID: 11483982     DOI: 10.1038/35084503

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  36 in total

1.  Generation and comparative analysis of approximately 3.3 Mb of mouse genomic sequence orthologous to the region of human chromosome 7q11.23 implicated in Williams syndrome.

Authors:  Udaya DeSilva; Laura Elnitski; Jacquelyn R Idol; Johannah L Doyle; Weiniu Gan; James W Thomas; Scott Schwartz; Nicole L Dietrich; Stephen M Beckstrom-Sternberg; Jennifer C McDowell; Robert W Blakesley; Gerard G Bouffard; Pamela J Thomas; Jeffrey W Touchman; Webb Miller; Eric D Green
Journal:  Genome Res       Date:  2002-01       Impact factor: 9.043

Review 2.  Structural genomics: a pipeline for providing structures for the biologist.

Authors:  Mark R Chance; Anne R Bresnick; Stephen K Burley; Jian-Sheng Jiang; Christopher D Lima; Andrej Sali; Steven C Almo; Jeffrey B Bonanno; John A Buglino; Simon Boulton; Hua Chen; Narayanan Eswar; Guoshun He; Raymond Huang; Valentin Ilyin; Linda McMahan; Ursula Pieper; Soumya Ray; Marc Vidal; Li Kai Wang
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

3.  High-resolution radiation hybrid map of wheat chromosome 1D.

Authors:  Venu Kalavacharla; Khwaja Hossain; Yong Gu; Oscar Riera-Lizarazu; M Isabel Vales; Suresh Bhamidimarri; Jose L Gonzalez-Hernandez; Shivcharan S Maan; Shahryar F Kianian
Journal:  Genetics       Date:  2006-04-19       Impact factor: 4.562

4.  A BAC-based physical map of the chicken genome.

Authors:  Chengwei Ren; Mi-Kyung Lee; Bo Yan; Kejiao Ding; Bettye Cox; Michael N Romanov; Jennifer A Price; Jerry B Dodgson; Hong-Bin Zhang
Journal:  Genome Res       Date:  2003-12       Impact factor: 9.043

5.  Identification and characterization of multi-species conserved sequences.

Authors:  Elliott H Margulies; Mathieu Blanchette; David Haussler; Eric D Green
Journal:  Genome Res       Date:  2003-12       Impact factor: 9.043

6.  Pericentromeric duplications in the laboratory mouse.

Authors:  James W Thomas; Mary G Schueler; Tyrone J Summers; Robert W Blakesley; Jennifer C McDowell; Pamela J Thomas; Jacquelyn R Idol; Valerie V B Maduro; Shih-Queen Lee-Lin; Jeffrey W Touchman; Gerard G Bouffard; Stephen M Beckstrom-Sternberg; Eric D Green
Journal:  Genome Res       Date:  2003-01       Impact factor: 9.043

7.  An intermediate grade of finished genomic sequence suitable for comparative analyses.

Authors:  Robert W Blakesley; Nancy F Hansen; James C Mullikin; Pamela J Thomas; Jennifer C McDowell; Baishali Maskeri; Alice C Young; Beatrice Benjamin; Shelise Y Brooks; Bradley I Coleman; Jyoti Gupta; Shi-Ling Ho; Eric M Karlins; Quino L Maduro; Sirintorn Stantripop; Cyrus Tsurgeon; Jennifer L Vogt; Michelle A Walker; Catherine A Masiello; Xiaobin Guan; Gerard G Bouffard; Eric D Green
Journal:  Genome Res       Date:  2004-10-12       Impact factor: 9.043

8.  CAGE: Combinatorial Analysis of Gene-cluster Evolution.

Authors:  Giltae Song; Louxin Zhang; Tomas Vinar; Webb Miller
Journal:  J Comput Biol       Date:  2010-09       Impact factor: 1.479

9.  Sequencing and analyzing the t(1;7) reciprocal translocation breakpoints associated with a case of childhood-onset schizophrenia/autistic disorder.

Authors:  Jacquelyn R Idol; Anjene M Addington; Robert T Long; Judith L Rapoport; Eric D Green
Journal:  J Autism Dev Disord       Date:  2007-09-19

10.  Parallel construction of orthologous sequence-ready clone contig maps in multiple species.

Authors:  James W Thomas; Arjun B Prasad; Tyrone J Summers; Shih-Queen Lee-Lin; Valerie V B Maduro; Jacquelyn R Idol; Joseph F Ryan; Pamela J Thomas; Jennifer C McDowell; Eric D Green
Journal:  Genome Res       Date:  2002-08       Impact factor: 9.043

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