Literature DB >> 11477222

Tolerance of point substitution of methionine for isoleucine in hen egg white lysozyme.

T Ohmura1, T Ueda, Y Hashimoto, T Imoto.   

Abstract

X-ray structure determination of proteins by using the multiple-wavelength anomalous dispersion method targeting selenomethionine is now widely employed. Isoleucine was examined for the second choice of the substitution of methionine next to leucine. We performed a systematic mutational study of the substitutions of methionine for isoleucine. All mutated lysozymes were less stable than the wild-type by about 1 kcal/mol and it is suggested that this instability was caused by the change in residual hydrophobicity from isoleucine to methionine. The X-ray structures of all mutant lysozymes were very similar to that of the wild-type. In addition, both the accessible surface areas and the conformation of the side chain of methionine in all mutant lysozymes were similar to those of the side chain at the respective isoleucine in the wild-type. Therefore, it is suggested that the mutation from isoleucine to methionine in a protein can be considered as a "safe" substitution.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11477222     DOI: 10.1093/protein/14.6.421

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  17 in total

1.  Structural studies of the catalytic core of the primate foamy virus (PFV-1) integrase.

Authors:  Stéphane Réty; Lenka Reaeábková; Barbara Dubanchet; Jan Silhán; Pierre Legrand; Anita Lewit-Bentley
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2010-07-27

2.  Effect of leucine-to-methionine substitutions on the diffraction quality of histone chaperone SET/TAF-Ibeta/INHAT crystals.

Authors:  Miki Senda; Shinsuke Muto; Masami Horikoshi; Toshiya Senda
Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun       Date:  2008-09-30

3.  Post-Translational Backbone Engineering through Selenomethionine-Mediated Incorporation of Freidinger Lactams.

Authors:  Dillon T Flood; Nicholas L Yan; Philip E Dawson
Journal:  Angew Chem Int Ed Engl       Date:  2018-06-11       Impact factor: 15.336

4.  A metazoan ortholog of SpoT hydrolyzes ppGpp and functions in starvation responses.

Authors:  Dawei Sun; Gina Lee; Jun Hee Lee; Hye-Yeon Kim; Hyun-Woo Rhee; Seung-Yeol Park; Kyung-Jin Kim; Yongsung Kim; Bo Yeon Kim; Jong-In Hong; Chankyu Park; Hyon E Choy; Jung Hoe Kim; Young Ho Jeon; Jongkyeong Chung
Journal:  Nat Struct Mol Biol       Date:  2010-09-05       Impact factor: 15.369

5.  Characterization of recombinant endo-1,4-β-xylanase of Bacillus halodurans C-125 and rational identification of hot spot amino acid residues responsible for enhancing thermostability by an in-silico approach.

Authors:  Malik Siddique Mahmood; Faiz Rasul; Mahjabeen Saleem; Amber Afroz; Muhammad Faheem Malik; Naeem Mehmood Ashraf; Umar Rashid; Shumaila Naz; Nadia Zeeshan
Journal:  Mol Biol Rep       Date:  2019-05-11       Impact factor: 2.316

6.  Structural and functional assays of AtTLP18.3 identify its novel acid phosphatase activity in thylakoid lumen.

Authors:  Hsin-Yi Wu; Mao-Sen Liu; Tsan-Piao Lin; Yi-Sheng Cheng
Journal:  Plant Physiol       Date:  2011-09-09       Impact factor: 8.340

7.  Importance of secondary structural specificity determinants in protein folding: insertion of a native beta-sheet sequence into an alpha-helical coiled-coil.

Authors:  Stanley C Kwok; Colin T Mant; Robert S Hodges
Journal:  Protein Sci       Date:  2002-06       Impact factor: 6.725

8.  Thermodynamic effects of noncoded and coded methionine substitutions in calmodulin.

Authors:  Aaron P Yamniuk; Hiroaki Ishida; Dustin Lippert; Hans J Vogel
Journal:  Biophys J       Date:  2009-02-18       Impact factor: 4.033

9.  Mutations in cardiac T-box factor gene TBX20 are associated with diverse cardiac pathologies, including defects of septation and valvulogenesis and cardiomyopathy.

Authors:  Edwin P Kirk; Margaret Sunde; Mauro W Costa; Scott A Rankin; Orit Wolstein; M Leticia Castro; Tanya L Butler; Changbaig Hyun; Guanglan Guo; Robyn Otway; Joel P Mackay; Leigh B Waddell; Andrew D Cole; Christopher Hayward; Anne Keogh; Peter Macdonald; Lyn Griffiths; Diane Fatkin; Gary F Sholler; Aaron M Zorn; Michael P Feneley; David S Winlaw; Richard P Harvey
Journal:  Am J Hum Genet       Date:  2007-06-15       Impact factor: 11.025

10.  Combining secondary-structure and protein solvent-accessibility predictions in methionine substitution for anomalous dispersion.

Authors:  Hsin-Yi Wu; Yi-Sheng Cheng
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-02-19       Impact factor: 1.056

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.