Literature DB >> 11459974

Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli.

P Pham1, S Rangarajan, R Woodgate, M F Goodman.   

Abstract

DNA polymerase V, composed of a heterotrimer of the DNA damage-inducible UmuC and UmuD(2)(') proteins, working in conjunction with RecA, single-stranded DNA (ssDNA)-binding protein (SSB), beta sliding clamp, and gamma clamp loading complex, are responsible for most SOS lesion-targeted mutations in Escherichia coli, by catalyzing translesion synthesis (TLS). DNA polymerase II, the product of the damage-inducible polB (dinA ) gene plays a pivotal role in replication-restart, a process that bypasses DNA damage in an error-free manner. Replication-restart takes place almost immediately after the DNA is damaged (approximately 2 min post-UV irradiation), whereas TLS occurs after pol V is induced approximately 50 min later. We discuss recent data for pol V-catalyzed TLS and pol II-catalyzed replication-restart. Specific roles during TLS for pol V and each of its accessory factors have been recently determined. Although the precise molecular mechanism of pol II-dependent replication-restart remains to be elucidated, it has recently been shown to operate in conjunction with RecFOR and PriA proteins.

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Year:  2001        PMID: 11459974      PMCID: PMC37442          DOI: 10.1073/pnas.111007198

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  52 in total

1.  A phenotype for enigmatic DNA polymerase II: a pivotal role for pol II in replication restart in UV-irradiated Escherichia coli.

Authors:  S Rangarajan; R Woodgate; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-03       Impact factor: 11.205

2.  Visualization of two binding sites for the Escherichia coli UmuD'(2)C complex (DNA pol V) on RecA-ssDNA filaments.

Authors:  E G Frank; N Cheng; C C Do; M E Cerritelli; I Bruck; M F Goodman; E H Egelman; R Woodgate; A C Steven
Journal:  J Mol Biol       Date:  2000-03-31       Impact factor: 5.469

Review 3.  Dynamic spatial regulation in the bacterial cell.

Authors:  L Shapiro; R Losick
Journal:  Cell       Date:  2000-01-07       Impact factor: 41.582

4.  Roles of E. coli DNA polymerases IV and V in lesion-targeted and untargeted SOS mutagenesis.

Authors:  M Tang; P Pham; X Shen; J S Taylor; M O'Donnell; R Woodgate; M F Goodman
Journal:  Nature       Date:  2000-04-27       Impact factor: 49.962

5.  The mutagenesis protein UmuC is a DNA polymerase activated by UmuD', RecA, and SSB and is specialized for translesion replication.

Authors:  N B Reuven; G Arad; A Maor-Shoshani; Z Livneh
Journal:  J Biol Chem       Date:  1999-11-05       Impact factor: 5.157

6.  The Escherichia coli SOS mutagenesis proteins UmuD and UmuD' interact physically with the replicative DNA polymerase.

Authors:  M D Sutton; T Opperman; G C Walker
Journal:  Proc Natl Acad Sci U S A       Date:  1999-10-26       Impact factor: 11.205

Review 7.  Recombinational repair of DNA damage in Escherichia coli and bacteriophage lambda.

Authors:  A Kuzminov
Journal:  Microbiol Mol Biol Rev       Date:  1999-12       Impact factor: 11.056

8.  All three SOS-inducible DNA polymerases (Pol II, Pol IV and Pol V) are involved in induced mutagenesis.

Authors:  R Napolitano; R Janel-Bintz; J Wagner; R P Fuchs
Journal:  EMBO J       Date:  2000-11-15       Impact factor: 11.598

9.  Identification of additional genes belonging to the LexA regulon in Escherichia coli.

Authors:  A R Fernández De Henestrosa; T Ogi; S Aoyagi; D Chafin; J J Hayes; H Ohmori; R Woodgate
Journal:  Mol Microbiol       Date:  2000-03       Impact factor: 3.501

10.  Biochemical basis of SOS-induced mutagenesis in Escherichia coli: reconstitution of in vitro lesion bypass dependent on the UmuD'2C mutagenic complex and RecA protein.

Authors:  M Tang; I Bruck; R Eritja; J Turner; E G Frank; R Woodgate; M O'Donnell; M F Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  1998-08-18       Impact factor: 11.205

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  35 in total

1.  Stationary-phase mutation in the bacterial chromosome: recombination protein and DNA polymerase IV dependence.

Authors:  H J Bull; M J Lombardo; S M Rosenberg
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

2.  High-fidelity in vivo replication of DNA base shape mimics without Watson-Crick hydrogen bonds.

Authors:  James C Delaney; Paul T Henderson; Sandra A Helquist; Juan C Morales; John M Essigmann; Eric T Kool
Journal:  Proc Natl Acad Sci U S A       Date:  2003-04-03       Impact factor: 11.205

3.  Translesion synthesis past the C8- and N2-deoxyguanosine adducts of the dietary mutagen 2-Amino-3-methylimidazo[4,5-f]quinoline in the NarI recognition sequence by prokaryotic DNA polymerases.

Authors:  James S Stover; Goutam Chowdhury; Hong Zang; F Peter Guengerich; Carmelo J Rizzo
Journal:  Chem Res Toxicol       Date:  2006-11       Impact factor: 3.739

Review 4.  Formation and repair of interstrand cross-links in DNA.

Authors:  David M Noll; Tracey McGregor Mason; Paul S Miller
Journal:  Chem Rev       Date:  2006-02       Impact factor: 60.622

Review 5.  SSB as an organizer/mobilizer of genome maintenance complexes.

Authors:  Robert D Shereda; Alexander G Kozlov; Timothy M Lohman; Michael M Cox; James L Keck
Journal:  Crit Rev Biochem Mol Biol       Date:  2008 Sep-Oct       Impact factor: 8.250

6.  DNA polymerases are error-prone at RecA-mediated recombination intermediates.

Authors:  Richard T Pomerantz; Myron F Goodman; Michael E O'Donnell
Journal:  Cell Cycle       Date:  2013-07-29       Impact factor: 4.534

7.  Urinary tract infection drives genome instability in uropathogenic Escherichia coli and necessitates translesion synthesis DNA polymerase IV for virulence.

Authors:  Damian Gawel; Patrick C Seed
Journal:  Virulence       Date:  2011-05-01       Impact factor: 5.882

8.  Resistance to UV Irradiation Caused by Inactivation of nurA and herA Genes in Thermus thermophilus.

Authors:  Yuki Fujii; Masao Inoue; Kenji Fukui; Seiki Kuramitsu; Ryoji Masui
Journal:  J Bacteriol       Date:  2018-07-25       Impact factor: 3.490

9.  BapE DNA endonuclease induces an apoptotic-like response to DNA damage in Caulobacter.

Authors:  Julia Bos; Anastasiya A Yakhnina; Zemer Gitai
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-16       Impact factor: 11.205

10.  Inhibition of translesion DNA polymerase by archaeal reverse gyrase.

Authors:  Anna Valenti; Giuseppe Perugino; Takehiko Nohmi; Mosè Rossi; Maria Ciaramella
Journal:  Nucleic Acids Res       Date:  2009-05-14       Impact factor: 16.971

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