Literature DB >> 11459957

Rescue of stalled replication forks by RecG: simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation.

P McGlynn1, R G Lloyd.   

Abstract

Modification of damaged replication forks is emerging as a crucial factor for efficient chromosomal duplication and the avoidance of genetic instability. The RecG helicase of Escherichia coli, which is involved in recombination and DNA repair, has been postulated to act on stalled replication forks to promote replication restart via the formation of a four-stranded (Holliday) junction. Here we show that RecG can actively unwind the leading and lagging strand arms of model replication fork structures in vitro. Unwinding is achieved in each case by simultaneous interaction with and translocation along both the leading and lagging strand templates at a fork. Disruption of either of these interactions dramatically inhibits unwinding of the opposing duplex arm. Thus, RecG translocates simultaneously along two DNA strands, one with 5'-3' and the other with 3'-5' polarity. The unwinding of both nascent strands at a damaged fork, and their subsequent annealing to form a Holliday junction, may explain the ability of RecG to promote replication restart. Moreover, the preferential binding of partial forks lacking a leading strand suggests that RecG may have the ability to target stalled replication intermediates in vivo in which lagging strand synthesis has continued beyond the leading strand.

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Year:  2001        PMID: 11459957      PMCID: PMC37425          DOI: 10.1073/pnas.111008698

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

Review 1.  Quality control by DNA repair.

Authors:  T Lindahl; R D Wood
Journal:  Science       Date:  1999-12-03       Impact factor: 47.728

2.  PriA-directed assembly of a primosome on D loop DNA.

Authors:  J Liu; K J Marians
Journal:  J Biol Chem       Date:  1999-08-27       Impact factor: 5.157

Review 3.  Initiation of genetic recombination and recombination-dependent replication.

Authors:  S C Kowalczykowski
Journal:  Trends Biochem Sci       Date:  2000-04       Impact factor: 13.807

4.  Modulation of RNA polymerase by (p)ppGpp reveals a RecG-dependent mechanism for replication fork progression.

Authors:  P McGlynn; R G Lloyd
Journal:  Cell       Date:  2000-03-31       Impact factor: 41.582

5.  Positive torsional strain causes the formation of a four-way junction at replication forks.

Authors:  L Postow; C Ullsperger; R W Keller; C Bustamante; A V Vologodskii; N R Cozzarelli
Journal:  J Biol Chem       Date:  2000-10-30       Impact factor: 5.157

6.  Uncoupling DNA translocation and helicase activity in PcrA: direct evidence for an active mechanism.

Authors:  P Soultanas; M S Dillingham; P Wiley; M R Webb; D B Wigley
Journal:  EMBO J       Date:  2000-07-17       Impact factor: 11.598

7.  Characterisation of the catalytically active form of RecG helicase.

Authors:  P McGlynn; A A Mahdi; R G Lloyd
Journal:  Nucleic Acids Res       Date:  2000-06-15       Impact factor: 16.971

8.  Mechanism of E. coli RecA protein directed strand exchanges in post-replication repair of DNA.

Authors:  S C West; E Cassuto; P Howard-Flanders
Journal:  Nature       Date:  1981-12-17       Impact factor: 49.962

9.  RuvABC-dependent double-strand breaks in dnaBts mutants require recA.

Authors:  M Seigneur; S D Ehrlich; B Michel
Journal:  Mol Microbiol       Date:  2000-11       Impact factor: 3.501

10.  Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled.

Authors:  P McGlynn; R G Lloyd; K J Marians
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

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  85 in total

Review 1.  Modularity and specialization in superfamily 1 and 2 helicases.

Authors:  Martin R Singleton; Dale B Wigley
Journal:  J Bacteriol       Date:  2002-04       Impact factor: 3.490

Review 2.  Nucleic acid recognition by OB-fold proteins.

Authors:  Douglas L Theobald; Rachel M Mitton-Fry; Deborah S Wuttke
Journal:  Annu Rev Biophys Biomol Struct       Date:  2003-02-18

3.  A model for dsDNA translocation revealed by a structural motif common to RecG and Mfd proteins.

Authors:  Akeel A Mahdi; Geoffrey S Briggs; Gary J Sharples; Qin Wen; Robert G Lloyd
Journal:  EMBO J       Date:  2003-02-03       Impact factor: 11.598

4.  RuvAB and RecG are not essential for the recovery of DNA synthesis following UV-induced DNA damage in Escherichia coli.

Authors:  Janet R Donaldson; Charmain T Courcelle; Justin Courcelle
Journal:  Genetics       Date:  2004-04       Impact factor: 4.562

Review 5.  Interplay between DNA replication, recombination and repair based on the structure of RecG helicase.

Authors:  Geoffrey S Briggs; Akeel A Mahdi; Geoffrey R Weller; Qin Wen; Robert G Lloyd
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2004-01-29       Impact factor: 6.237

6.  Effect of single-strand break on branch migration and folding dynamics of Holliday junctions.

Authors:  Dmytro Palets; Alexander Y Lushnikov; Mikhail A Karymov; Yuri L Lyubchenko
Journal:  Biophys J       Date:  2010-09-22       Impact factor: 4.033

7.  RecG protein and single-strand DNA exonucleases avoid cell lethality associated with PriA helicase activity in Escherichia coli.

Authors:  Christian J Rudolph; Akeel A Mahdi; Amy L Upton; Robert G Lloyd
Journal:  Genetics       Date:  2010-07-20       Impact factor: 4.562

8.  RecA4142 causes SOS constitutive expression by loading onto reversed replication forks in Escherichia coli K-12.

Authors:  Jarukit Edward Long; Shawn C Massoni; Steven J Sandler
Journal:  J Bacteriol       Date:  2010-03-19       Impact factor: 3.490

9.  Mycobacterium tuberculosis RecG protein but not RuvAB or RecA protein is efficient at remodeling the stalled replication forks: implications for multiple mechanisms of replication restart in mycobacteria.

Authors:  Roshan Singh Thakur; Shivakumar Basavaraju; Jasbeer Singh Khanduja; K Muniyappa; Ganesh Nagaraju
Journal:  J Biol Chem       Date:  2015-08-14       Impact factor: 5.157

10.  In vivo evidence for a recA-independent recombination process in Escherichia coli that permits completion of replication of DNA containing UV damage in both strands.

Authors:  Ali I Ozgenc; Edward S Szekeres; Christopher W Lawrence
Journal:  J Bacteriol       Date:  2005-03       Impact factor: 3.490

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