Literature DB >> 11456666

Synthesis and characterization of alkanethiolate-coordinated iron porphyrins and their dioxygen adducts as models for the active center of cytochrome p450: direct evidence for hydrogen bonding to bound dioxygen.

F Tani1, M Matsu-ura, S Nakayama, M Ichimura, N Nakamura, Y Naruta.   

Abstract

Two kinds of novel cytochrome P450 models, which have alkanethiolate axial ligands and hydroxyl groups inside molecular cavities, were designed and synthesized as functional O(2) binding systems. A superstructured porphyrin, designated as "twin-coronet" porphyrin, was used as the common framework of the model complexes. This porphyrin bears four binaphthalene bridges on the both sides and forms two pockets surrounded by the bulky aromatic rings. Thiobenzyloxy and thioglycolate moieties, which contain an alkanethiolate group exhibiting various electron-donating abilities and degrees of bulkiness, were covalently linked to twin-coronet porphyrin to yield thiolate-coordinated hemes, TCP-TB and TCP-TG (twin-coronet porphyrin with thiobenzyloxy and thioglycolate groups), respectively. Both ferric complexes exhibited high stability during usual experimental manipulation under air and were characterized by MS, UV/vis, ESR spectroscopies, and CV. The ESR spectra exhibited low-spin signals (TCP-TB: g = 2.334, 2.210, 1.959; TCP-TG: g = 2.313, 2.209, 1.966). The cyclic voltammogram of TCP-TB in CH(3)CN gave a quasi-reversible wave which corresponds to the Fe(III)/Fe(II) redox couple: E(p)()(/2) = -1.35 V (vs Fc/Fc(+)). On the other hand, TCP-TG showed a fine reversible wave: E(1/2) (Fe(III)/Fe(II)) = -1.12 V. The stable dioxygen adducts were formed in the reaction of the ferric complexes with KO(2) under an oxygen atmosphere and characterized by UV/vis and resonance Raman (RR) spectroscopies. In the RR spectra, the nu(O--O) bands of the dioxygen adducts were observed at 1138 cm(-1) (TCP-TB) and 1137 cm(-1) (TCP-TG). The hypothesis that hydrogen bonding between the bound oxygen and the hydroxyl groups of the binaphthyl moieties could increase their stability was verified by RR spectroscopy. When all hydroxyl groups were deuterated, only the frequencies of the nu(O--O) bands were upshifted by 2 cm(-1) without any perturbation in the porphyrin skeleton. This work shows the first direct evidence for a hydrogen bond to dioxygen in an oxy form of a thiolate-coordinated heme model system. These results are discussed in context of the process of dioxygen binding and activation in cytochrome P450.

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Year:  2001        PMID: 11456666     DOI: 10.1021/ja003430y

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  10 in total

1.  Catalytic reduction of dioxygen to water with a monomeric manganese complex at room temperature.

Authors:  Ryan L Shook; Sonja M Peterson; John Greaves; Curtis Moore; Arnold L Rheingold; A S Borovik
Journal:  J Am Chem Soc       Date:  2011-03-22       Impact factor: 15.419

2.  Sulfonamido tripods: tuning redox potentials via ligand modifications.

Authors:  Nathanael Lau; Joseph W Ziller; A S Borovik
Journal:  Polyhedron       Date:  2015-01-08       Impact factor: 3.052

Review 3.  Spectroscopic studies of the cytochrome P450 reaction mechanisms.

Authors:  Piotr J Mak; Ilia G Denisov
Journal:  Biochim Biophys Acta Proteins Proteom       Date:  2017-06-28       Impact factor: 3.036

4.  Human Cytochrome CYP17A1: The Structural Basis for Compromised Lyase Activity with 17-Hydroxyprogesterone.

Authors:  Piotr J Mak; Ruchia Duggal; Ilia G Denisov; Michael C Gregory; Stephen G Sligar; James R Kincaid
Journal:  J Am Chem Soc       Date:  2018-06-05       Impact factor: 15.419

5.  Synthesis, structure, and physical properties for a series of monomeric iron(III) hydroxo complexes with varying hydrogen-bond networks.

Authors:  Jhumpa Mukherjee; Robie L Lucas; Matthew K Zart; Douglas R Powell; Victor W Day; A S Borovik
Journal:  Inorg Chem       Date:  2008-05-23       Impact factor: 5.165

6.  Resonance Raman characterization of the peroxo and hydroperoxo intermediates in cytochrome P450.

Authors:  Ilia G Denisov; Piotr J Mak; Thomas M Makris; Stephen G Sligar; James R Kincaid
Journal:  J Phys Chem A       Date:  2008-12-18       Impact factor: 2.781

Review 7.  Synthetic Fe/Cu Complexes: Toward Understanding Heme-Copper Oxidase Structure and Function.

Authors:  Suzanne M Adam; Gayan B Wijeratne; Patrick J Rogler; Daniel E Diaz; David A Quist; Jeffrey J Liu; Kenneth D Karlin
Journal:  Chem Rev       Date:  2018-10-29       Impact factor: 60.622

8.  P450 CYP17A1 Variant with a Disordered Proton Shuttle Assembly Retains Peroxo-Mediated Lyase Efficiency.

Authors:  Yilin Liu; Ilia G Denisov; Yelena V Grinkova; Stephen G Sligar; James R Kincaid
Journal:  Chemistry       Date:  2020-11-09       Impact factor: 5.236

Review 9.  Crossed and linked histories of tetrapyrrolic macrocycles and their use for engineering pores within sol-gel matrices.

Authors:  Miguel A García-Sánchez; Fernando Rojas-González; E Carmina Menchaca-Campos; Salvador R Tello-Solís; R Iris Y Quiroz-Segoviano; Luis A Diaz-Alejo; Eduardo Salas-Bañales; Antonio Campero
Journal:  Molecules       Date:  2013-01-04       Impact factor: 4.411

Review 10.  Isolating Fe-O2 Intermediates in Dioxygen Activation by Iron Porphyrin Complexes.

Authors:  Xiaoyan Lu; Shuang Wang; Jian-Hua Qin
Journal:  Molecules       Date:  2022-07-22       Impact factor: 4.927

  10 in total

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