Literature DB >> 11438657

Investigation of elements sufficient to imprint the mouse Air promoter.

F Sleutels1, D P Barlow.   

Abstract

Imprinted maternal-allele-specific expression of the mouse insulin-like growth-factor type 2 receptor (Igf2r) gene depends on a 3.7-kb element named region 2, located in the second intron of the gene. Region 2 carries a maternal-allele-specific methylation imprint and contains an imprinted CpG island promoter (Air) that expresses a noncoding antisense RNA from the paternal inherited allele only. Here, we use transgenes to test the minimal requirements for imprinting of Air and to test if the action of region 2 is restricted to Igf2r. Transgenes up to 9 kb with Air as a single promoter are expressed but not imprinted. When coupled to the Igf2r CpG island promoter on a 44-kb transgene, Air was imprinted in one of three lines. However, Air on a 4.6-kb fragment is also imprinted in 2 of 14 lines when inserted in an intron of an adenine phosphoribosyltransferase (Aprt) transgene, and in one line, the imprinted methylation and expression of Air have been transferred onto the Aprt CpG island promoter. These data suggest that a dual CpG island promoter setting may facilitate Air imprinting as a short transgene and also show that Air can transfer imprinting onto other genes. However, for reliable Air imprinting, elements are necessary that are located outside a 44-kb region spanning the Air-Igf2r promoters.

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Year:  2001        PMID: 11438657      PMCID: PMC87227          DOI: 10.1128/MCB.21.15.5008-5017.2001

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  40 in total

1.  Multiple mechanisms regulate imprinting of the mouse distal chromosome 7 gene cluster.

Authors:  T Caspary; M A Cleary; C C Baker; X J Guan; S M Tilghman
Journal:  Mol Cell Biol       Date:  1998-06       Impact factor: 4.272

2.  The imprinting box of the mouse Igf2r gene.

Authors:  Y Birger; R Shemer; J Perk; A Razin
Journal:  Nature       Date:  1999-01-07       Impact factor: 49.962

Review 3.  The sins of the fathers and mothers: genomic imprinting in mammalian development.

Authors:  S M Tilghman
Journal:  Cell       Date:  1999-01-22       Impact factor: 41.582

Review 4.  Competition--a common motif for the imprinting mechanism?

Authors:  D P Barlow
Journal:  EMBO J       Date:  1997-12-01       Impact factor: 11.598

5.  Cre-mediated somatic site-specific recombination in mice.

Authors:  K Akagi; V Sandig; M Vooijs; M Van der Valk; M Giovannini; M Strauss; A Berns
Journal:  Nucleic Acids Res       Date:  1997-05-01       Impact factor: 16.971

6.  Structure of the imprinted mouse Snrpn gene and establishment of its parental-specific methylation pattern.

Authors:  R Shemer; Y Birger; A D Riggs; A Razin
Journal:  Proc Natl Acad Sci U S A       Date:  1997-09-16       Impact factor: 11.205

7.  Imprinting of Igf2 and H19 from a 130 kb YAC transgene.

Authors:  J F Ainscough; T Koide; M Tada; S Barton; M A Surani
Journal:  Development       Date:  1997-09       Impact factor: 6.868

8.  Cytosine methylation and mammalian development.

Authors:  C P Walsh; T H Bestor
Journal:  Genes Dev       Date:  1999-01-01       Impact factor: 11.361

9.  Deletion of the H19 differentially methylated domain results in loss of imprinted expression of H19 and Igf2.

Authors:  J L Thorvaldsen; K L Duran; M S Bartolomei
Journal:  Genes Dev       Date:  1998-12-01       Impact factor: 11.361

10.  Determination of spontaneous loss of heterozygosity mutations in Aprt heterozygous mice.

Authors:  P P Van Sloun; S W Wijnhoven; H J Kool; R Slater; G Weeda; A A van Zeeland; P H Lohman; H Vrieling
Journal:  Nucleic Acids Res       Date:  1998-11-01       Impact factor: 16.971

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  17 in total

1.  The imprinted Air ncRNA is an atypical RNAPII transcript that evades splicing and escapes nuclear export.

Authors:  Christine I M Seidl; Stefan H Stricker; Denise P Barlow
Journal:  EMBO J       Date:  2006-07-27       Impact factor: 11.598

2.  Specific differentially methylated domain sequences direct the maintenance of methylation at imprinted genes.

Authors:  Bonnie Reinhart; Ariane Paoloni-Giacobino; J Richard Chaillet
Journal:  Mol Cell Biol       Date:  2006-09-05       Impact factor: 4.272

Review 3.  The silence RNA keeps: cis mechanisms of RNA mediated epigenetic silencing in mammals.

Authors:  Cristina Tufarelli
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2006-01-29       Impact factor: 6.237

4.  The long non-coding RNA Fendrr links epigenetic control mechanisms to gene regulatory networks in mammalian embryogenesis.

Authors:  Phillip Grote; Bernhard G Herrmann
Journal:  RNA Biol       Date:  2013-08-22       Impact factor: 4.652

5.  Long-range DNase I hypersensitivity mapping reveals the imprinted Igf2r and Air promoters share cis-regulatory elements.

Authors:  Florian M Pauler; Stefan H Stricker; Katarzyna E Warczok; Denise P Barlow
Journal:  Genome Res       Date:  2005-10       Impact factor: 9.043

6.  Shared role for differentially methylated domains of imprinted genes.

Authors:  Bonnie Reinhart; Mariam Eljanne; J Richard Chaillet
Journal:  Mol Cell Biol       Date:  2002-04       Impact factor: 4.272

7.  Analysis of imprinted murine Peg3 locus in transgenic mice.

Authors:  Irene Y Y Szeto; Sheila C Barton; E B Keverne; Azim M Surani
Journal:  Mamm Genome       Date:  2004-04       Impact factor: 2.957

8.  Identification of the human homolog of the imprinted mouse Air non-coding RNA.

Authors:  Iveta Y Yotova; Irena M Vlatkovic; Florian M Pauler; Katarzyna E Warczok; Peter F Ambros; Mitsuo Oshimura; Hans-Christian Theussl; Manfred Gessler; Erwin F Wagner; Denise P Barlow
Journal:  Genomics       Date:  2008-10-02       Impact factor: 5.736

9.  Epigenetic properties and identification of an imprint mark in the Nesp-Gnasxl domain of the mouse Gnas imprinted locus.

Authors:  Candice Coombes; Philippe Arnaud; Emma Gordon; Wendy Dean; Elizabeth A Coar; Christine M Williamson; Robert Feil; Jo Peters; Gavin Kelsey
Journal:  Mol Cell Biol       Date:  2003-08       Impact factor: 4.272

10.  Transcription is required for establishment of germline methylation marks at imprinted genes.

Authors:  Mita Chotalia; Sebastien A Smallwood; Nico Ruf; Claire Dawson; Diana Lucifero; Marga Frontera; Katherine James; Wendy Dean; Gavin Kelsey
Journal:  Genes Dev       Date:  2009-01-01       Impact factor: 11.361

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