Literature DB >> 11434105

On the relative content of G,C bases in codons of amino acids corresponding to class I and II aminoacyl-tRNA synthetases.

A R Cavalcanti1, R Ferreira.   

Abstract

We have analyzed the relative G,C content from protein coding regions of 530 organisms and found that the ratio of the G,C content of the codons of the amino acids corresponding to Class II and Class I aminoacyl-tRNA synthetases decreases in a statistically significant way from prokaryotes to animals. This can be interpreted assuming that an initial asymmetry between the G,C content of codons of Class I and II amino acids existed and has decreased in the course of evolution.

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Year:  2001        PMID: 11434105     DOI: 10.1023/a:1010639521100

Source DB:  PubMed          Journal:  Orig Life Evol Biosph        ISSN: 0169-6149            Impact factor:   1.950


  24 in total

1.  A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 A.

Authors:  S Cusack; C Berthet-Colominas; M Härtlein; N Nassar; R Leberman
Journal:  Nature       Date:  1990-09-20       Impact factor: 49.962

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Journal:  Microbiol Rev       Date:  1987-06

3.  Codon usage tabulated from the international DNA sequence databases; its status 1999.

Authors:  Y Nakamura; T Gojobori; T Ikemura
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

4.  Sequence fossils, triplet expansion, and reconstruction of earliest codons.

Authors:  E N Trifonov; T Bettecken
Journal:  Gene       Date:  1997-12-31       Impact factor: 3.688

5.  The class II aminoacyl-tRNA synthetases and their active site: evolutionary conservation of an ATP binding site.

Authors:  G Eriani; J Cavarelli; F Martin; L Ador; B Rees; J C Thierry; J Gangloff; D Moras
Journal:  J Mol Evol       Date:  1995-05       Impact factor: 2.395

6.  Simulation studies of self-replicating oligoribotides, with a proposal for the transition to a peptide-assisted stage.

Authors:  R Ferreira; K R Coutinho
Journal:  J Theor Biol       Date:  1993-10-07       Impact factor: 2.691

7.  Transfer-RNA: the early adaptor.

Authors:  M Eigen; R Winkler-Oswatitsch
Journal:  Naturwissenschaften       Date:  1981-05

8.  Partition of tRNA synthetases into two classes based on mutually exclusive sets of sequence motifs.

Authors:  G Eriani; M Delarue; O Poch; J Gangloff; D Moras
Journal:  Nature       Date:  1990-09-13       Impact factor: 49.962

9.  Archaeal-type lysyl-tRNA synthetase in the Lyme disease spirochete Borrelia burgdorferi.

Authors:  M Ibba; J L Bono; P A Rosa; D Söll
Journal:  Proc Natl Acad Sci U S A       Date:  1997-12-23       Impact factor: 11.205

10.  Species sampling has a major impact on phylogenetic inference.

Authors:  G Lecointre; H Philippe; H L Vân Lê; H Le Guyader
Journal:  Mol Phylogenet Evol       Date:  1993-09       Impact factor: 4.286

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