Literature DB >> 11423314

Review: Protein function at thermal extremes: balancing stability and flexibility.

P A Fields1.   

Abstract

No organism can survive across the entire temperature range found in the biosphere, and a given species can rarely support active metabolism across more than a few tens of degrees C. Nevertheless, life can be maintained at surprisingly extreme temperatures, from below -50 to over 110 degrees C. That proteins, which are assembled with the same 20 amino acids in all species, can function well at both extremes of this range illustrates the plasticity available in the construction of these macromolecules. In studying proteins from extremophiles, researchers have found no new amino acids, covalent modifications or structural motifs that explain the ability of these molecules to function in such harsh environments. Rather, subtle redistributions of the same intramolecular interactions required for protein stabilization at moderate temperatures are sufficient to maintain structural integrity at hot or cold extremes. The key to protein function, whether in polar seas or hot springs, is the maintenance of an appropriate balance between molecular stability on the one hand and structural flexibility on the other. Stability is needed to ensure the appropriate geometry for ligand binding, as well as to avoid denaturation, while flexibility is necessary to allow catalysis at a metabolically appropriate rate. Comparisons of homologous proteins from organisms spanning a wide range of thermal habitats show that adaptive mutations, as well as stabilizing solutes, maintain a balance between these two attributes, regardless of the temperature at which the protein functions.

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Year:  2001        PMID: 11423314     DOI: 10.1016/s1095-6433(00)00359-7

Source DB:  PubMed          Journal:  Comp Biochem Physiol A Mol Integr Physiol        ISSN: 1095-6433            Impact factor:   2.320


  94 in total

1.  Cold-adapted digestive aspartic protease of the clawed lobsters Homarus americanus and Homarus gammarus: biochemical characterization.

Authors:  Liliana Rojo; Fernando García-Carreño; Maria de Los Angeles Navarrete del Toro
Journal:  Mar Biotechnol (NY)       Date:  2012-05-31       Impact factor: 3.619

2.  Temperature effects on the kinetic properties of the rabbit intestinal oligopeptide cotransporter PepT1.

Authors:  Elena Bossi; Francesca Cherubino; Eleonora Margheritis; Ayodele Stephen Oyadeyi; Alessandra Vollero; Antonio Peres
Journal:  Pflugers Arch       Date:  2012-06-23       Impact factor: 3.657

3.  Packing of the extracellular domain hydrophobic core has evolved to facilitate pentameric ligand-gated ion channel function.

Authors:  Cosma D Dellisanti; Sonya M Hanson; Lin Chen; Cynthia Czajkowski
Journal:  J Biol Chem       Date:  2010-11-22       Impact factor: 5.157

4.  Molecular basis of activation of endopeptidase activity of botulinum neurotoxin type E.

Authors:  Roshan V Kukreja; Shashi K Sharma; Bal Ram Singh
Journal:  Biochemistry       Date:  2010-03-23       Impact factor: 3.162

5.  Conserved quantitative stability/flexibility relationships (QSFR) in an orthologous RNase H pair.

Authors:  Dennis R Livesay; Donald J Jacobs
Journal:  Proteins       Date:  2006-01-01

6.  Cold sensitivity of thermophilic and mesophilic RNA polymerases.

Authors:  A Kulbachinskiy; I Bass; E Bogdanova; A Goldfarb; V Nikiforov
Journal:  J Bacteriol       Date:  2004-11       Impact factor: 3.490

7.  Protein stability promotes evolvability.

Authors:  Jesse D Bloom; Sy T Labthavikul; Christopher R Otey; Frances H Arnold
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-31       Impact factor: 11.205

8.  Thermal limits and adaptation in marine Antarctic ectotherms: an integrative view.

Authors:  Hans O Pörtner; Lloyd Peck; George Somero
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2007-12-29       Impact factor: 6.237

9.  Protein dynamics and stability: the distribution of atomic fluctuations in thermophilic and mesophilic dihydrofolate reductase derived using elastic incoherent neutron scattering.

Authors:  Lars Meinhold; David Clement; Moeava Tehei; Roy Daniel; John L Finney; Jeremy C Smith
Journal:  Biophys J       Date:  2008-02-29       Impact factor: 4.033

10.  Bacterial growth at -15 °C; molecular insights from the permafrost bacterium Planococcus halocryophilus Or1.

Authors:  Nadia C S Mykytczuk; Simon J Foote; Chris R Omelon; Gordon Southam; Charles W Greer; Lyle G Whyte
Journal:  ISME J       Date:  2013-02-07       Impact factor: 10.302

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