Literature DB >> 11418242

Two Arabidopsis homologs of the animal trithorax genes: a new structural domain is a signature feature of the trithorax gene family.

R Alvarez-Venegas1, Z Avramova.   

Abstract

Two Arabidopsis genes have been characterized as first examples of plant genes homologous to the animal trithorax genes. The Arabidopsis genes are highly similar but display different tissue and development expression patterns. One of them was ubiquitously expressed, with highest levels registered in young seedlings. The other gene was less active in all tested tissues, was not expressed in mature leaves but was highly expressed in roots. A new structural motif common to all TRX-related proteins has been identified. This new architectural element was found only in genes of multicellular species and is present in all genes belonging to the trithorax family. Along with the SET domain and the PHD fingers, this new element is a signature feature for the trithorax gene family.

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Year:  2001        PMID: 11418242     DOI: 10.1016/s0378-1119(01)00524-8

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  23 in total

Review 1.  Chromatin dynamics and Arabidopsis development.

Authors:  Frédéric Berger; Valérie Gaudin
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

2.  Regulation by polycomb and trithorax group proteins in Arabidopsis.

Authors:  Raúl Alvarez-Venegas
Journal:  Arabidopsis Book       Date:  2010-05-08

Review 3.  Regulation of transcription in plants: mechanisms controlling developmental switches.

Authors:  Kerstin Kaufmann; Alice Pajoro; Gerco C Angenent
Journal:  Nat Rev Genet       Date:  2010-11-10       Impact factor: 53.242

4.  Menin critically links MLL proteins with LEDGF on cancer-associated target genes.

Authors:  Akihiko Yokoyama; Michael L Cleary
Journal:  Cancer Cell       Date:  2008-07-08       Impact factor: 31.743

5.  Two distinct roles of ARABIDOPSIS HOMOLOG OF TRITHORAX1 (ATX1) at promoters and within transcribed regions of ATX1-regulated genes.

Authors:  Yong Ding; Zoya Avramova; Michael Fromm
Journal:  Plant Cell       Date:  2011-01-25       Impact factor: 11.277

6.  Proteolytically cleaved MLL subunits are susceptible to distinct degradation pathways.

Authors:  Akihiko Yokoyama; Francesca Ficara; Mark J Murphy; Christian Meisel; Alpana Naresh; Issay Kitabayashi; Michael L Cleary
Journal:  J Cell Sci       Date:  2011-07-01       Impact factor: 5.285

7.  Arabidopsis trithorax-related3/SET domain GROUP2 is required for the winter-annual habit of Arabidopsis thaliana.

Authors:  Jae-Young Yun; Yosuke Tamada; Ye Eun Kang; Richard M Amasino
Journal:  Plant Cell Physiol       Date:  2012-02-28       Impact factor: 4.927

8.  The Arabidopsis thaliana SET-domain-containing protein ASHH1/SDG26 interacts with itself and with distinct histone lysine methyltransferases.

Authors:  María del Pilar Valencia-Morales; José Alberto Camas-Reyes; José Luis Cabrera-Ponce; Raúl Alvarez-Venegas
Journal:  J Plant Res       Date:  2012-03-22       Impact factor: 2.629

9.  The Arabidopsis thaliana genome contains at least 29 active genes encoding SET domain proteins that can be assigned to four evolutionarily conserved classes.

Authors:  L O Baumbusch; T Thorstensen; V Krauss; A Fischer; K Naumann; R Assalkhou; I Schulz; G Reuter; R B Aalen
Journal:  Nucleic Acids Res       Date:  2001-11-01       Impact factor: 16.971

Review 10.  Epigenetic regulation by long noncoding RNAs in plants.

Authors:  Jae Bok Heo; Yong-Suk Lee; Sibum Sung
Journal:  Chromosome Res       Date:  2013-12       Impact factor: 5.239

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