Literature DB >> 11415366

Error threshold for spatially resolved evolution in the quasispecies model.

S Altmeyer1, J S McCaskill.   

Abstract

The error threshold for quasispecies in 1, 2, 3, and infinity dimensions is investigated by stochastic simulation and analytically. The results show a monotonic decrease in the maximal sustainable error probability with decreasing diffusion coefficient, independently of the spatial dimension. It is thereby established that physical interactions between sequences are necessary in order for spatial effects to enhance the stabilization of biological information. The analytically tractable behavior in an infinity-dimensional (simplex) space provides a good guide to the spatial dependence of the error threshold in lower dimensional Euclidean space.

Mesh:

Year:  2001        PMID: 11415366     DOI: 10.1103/PhysRevLett.86.5819

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  13 in total

1.  Evolutionary self-organization of cell-free genetic coding.

Authors:  R M Füchslin; J S McCaskill
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-24       Impact factor: 11.205

2.  Pathways to extinction: beyond the error threshold.

Authors:  Susanna C Manrubia; Esteban Domingo; Ester Lázaro
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-06-27       Impact factor: 6.237

Review 3.  Evolutionary dynamics of RNA-like replicator systems: A bioinformatic approach to the origin of life.

Authors:  Nobuto Takeuchi; Paulien Hogeweg
Journal:  Phys Life Rev       Date:  2012-06-13       Impact factor: 11.025

4.  Multilevel selection in models of prebiotic evolution II: a direct comparison of compartmentalization and spatial self-organization.

Authors:  Nobuto Takeuchi; Paulien Hogeweg
Journal:  PLoS Comput Biol       Date:  2009-10-16       Impact factor: 4.475

5.  Effect of stalling after mismatches on the error catastrophe in nonenzymatic nucleic acid replication.

Authors:  Sudha Rajamani; Justin K Ichida; Tibor Antal; Douglas A Treco; Kevin Leu; Martin A Nowak; Jack W Szostak; Irene A Chen
Journal:  J Am Chem Soc       Date:  2010-04-28       Impact factor: 15.419

6.  Severe hindrance of viral infection propagation in spatially extended hosts.

Authors:  José A Capitán; José A Cuesta; Susanna C Manrubia; Jacobo Aguirre
Journal:  PLoS One       Date:  2011-08-23       Impact factor: 3.240

7.  Quasispecies spatial models for RNA viruses with different replication modes and infection strategies.

Authors:  Josep Sardanyés; Santiago F Elena
Journal:  PLoS One       Date:  2011-09-19       Impact factor: 3.240

Review 8.  From quasispecies to quasispaces: coding and cooperation in chemical and electronic systems.

Authors:  John S McCaskill
Journal:  Eur Biophys J       Date:  2018-03-02       Impact factor: 2.095

9.  Transition to diversification by competition for multiple resources in catalytic reaction networks.

Authors:  Atsushi Kamimura; Kunihiko Kaneko
Journal:  J Syst Chem       Date:  2015-04-02

10.  The origin of life is a spatially localized stochastic transition.

Authors:  Meng Wu; Paul G Higgs
Journal:  Biol Direct       Date:  2012-11-24       Impact factor: 4.540

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