Literature DB >> 11414927

Rectified Brownian motion and kinesin motion along microtubules.

R F Fox1, M H Choi.   

Abstract

The mechanism of rectified Brownian movement is used to analyze measured data for kinesin motion along microtubules. A key component of the mechanism is the diffusive movement of the microtubule binding heads of kinesin during the adenosine triphosphate (ATP) cycle. The first-passage time distribution for this step is analyzed in detail and is shown to be responsible for observed load-velocity profiles. The ATPase activity of the kinesin heads is that of a nucleotide switch and not that of a direct chemomechanical energy converter. Experimental data acquisition, rate constants, and alternative explanations are discussed. The mechanism described in this paper is fundamental to the nanobiology of intracellular processes.

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Year:  2001        PMID: 11414927     DOI: 10.1103/PhysRevE.63.051901

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  8 in total

1.  Kinesin's biased stepping mechanism: amplification of neck linker zippering.

Authors:  William H Mather; Ronald F Fox
Journal:  Biophys J       Date:  2006-07-14       Impact factor: 4.033

2.  A model for dynamics of primer extension by eukaryotic DNA primase.

Authors:  Ping Xie
Journal:  Eur Biophys J       Date:  2011-09-06       Impact factor: 1.733

Review 3.  The Kinesin-1 Chemomechanical Cycle: Stepping Toward a Consensus.

Authors:  William O Hancock
Journal:  Biophys J       Date:  2016-03-29       Impact factor: 4.033

Review 4.  Mechanism of processive movement of monomeric and dimeric kinesin molecules.

Authors:  Ping Xie
Journal:  Int J Biol Sci       Date:  2010-11-03       Impact factor: 6.580

5.  MutS switches between two fundamentally distinct clamps during mismatch repair.

Authors:  Cherlhyun Jeong; Won-Ki Cho; Kyung-Mi Song; Christopher Cook; Tae-Young Yoon; Changill Ban; Richard Fishel; Jong-Bong Lee
Journal:  Nat Struct Mol Biol       Date:  2011-01-30       Impact factor: 15.369

6.  Monte Carlo analysis of neck linker extension in kinesin molecular motors.

Authors:  Matthew L Kutys; John Fricks; William O Hancock
Journal:  PLoS Comput Biol       Date:  2010-11-04       Impact factor: 4.475

7.  Rule-based spatial modeling with diffusing, geometrically constrained molecules.

Authors:  Gerd Gruenert; Bashar Ibrahim; Thorsten Lenser; Maiko Lohel; Thomas Hinze; Peter Dittrich
Journal:  BMC Bioinformatics       Date:  2010-06-07       Impact factor: 3.169

8.  A seesaw model for intermolecular gating in the kinesin motor protein.

Authors:  Charles V Sindelar
Journal:  Biophys Rev       Date:  2011-06-04
  8 in total

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