Literature DB >> 11413486

A tale of toroids in DNA metabolism.

M M Hingorani1, M O'Donnell.   

Abstract

A strikingly large number of the proteins involved in DNA metabolism adopt a toroidal -- or ring-shaped -- quaternary structure, even though they have completely unrelated functions. Given that these proteins all use DNA as a substrate, their convergence to one shape is probably not a coincidence. Ring-forming proteins may have been selected during evolution for advantages conferred by the toroidal shape on their interactions with DNA.

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Year:  2000        PMID: 11413486     DOI: 10.1038/35036044

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  25 in total

1.  Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer.

Authors:  M A Trakselis; S C Alley; E Abel-Santos; S J Benkovic
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-17       Impact factor: 11.205

2.  The genetic core of the universal ancestor.

Authors:  J Kirk Harris; Scott T Kelley; George B Spiegelman; Norman R Pace
Journal:  Genome Res       Date:  2003-03       Impact factor: 9.043

3.  Mutational analysis of Pyrococcus furiosus replication factor C based on the three-dimensional structure.

Authors:  Sonoko Ishino; Takuji Oyama; Mihoko Yuasa; Kosuke Morikawa; Yoshizumi Ishino
Journal:  Extremophiles       Date:  2003-02-04       Impact factor: 2.395

4.  Ring-shaped architecture of RecR: implications for its role in homologous recombinational DNA repair.

Authors:  Byung Il Lee; Kyoung Hoon Kim; Soo Jeong Park; Soo Hyun Eom; Hyun Kyu Song; Se Won Suh
Journal:  EMBO J       Date:  2004-04-29       Impact factor: 11.598

Review 5.  Eukaryotic MCM proteins: beyond replication initiation.

Authors:  Susan L Forsburg
Journal:  Microbiol Mol Biol Rev       Date:  2004-03       Impact factor: 11.056

6.  DNA helicase activity is associated with the replication initiator protein rep of tomato yellow leaf curl geminivirus.

Authors:  Danielle Clérot; Françoise Bernardi
Journal:  J Virol       Date:  2006-08-30       Impact factor: 5.103

7.  Protein arms in the kinetochore-microtubule interface of the yeast DASH complex.

Authors:  J J L Miranda; David S King; Stephen C Harrison
Journal:  Mol Biol Cell       Date:  2007-04-25       Impact factor: 4.138

8.  Modulation of Toroidal Proteins Dynamics in Favor of Functional Mechanisms upon Ligand Binding.

Authors:  Hongchun Li; Pemra Doruker; Guang Hu; Ivet Bahar
Journal:  Biophys J       Date:  2020-02-18       Impact factor: 4.033

Review 9.  Destroying the ring: Freeing DNA from Ku with ubiquitin.

Authors:  Lisa Postow
Journal:  FEBS Lett       Date:  2011-06-01       Impact factor: 4.124

10.  The RdgC protein employs a novel mechanism involving a finger domain to bind to circular DNA.

Authors:  Geoffrey S Briggs; Jing Yu; Akeel A Mahdi; Robert G Lloyd
Journal:  Nucleic Acids Res       Date:  2010-06-04       Impact factor: 16.971

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