Literature DB >> 11406390

Whole-genome analysis: annotations and updates.

T Gaasterland1, M Oprea.   

Abstract

The most important advances in the field of genome annotation over the past two years involve the use of cDNA sequences, protein structures and gene expression data to predict genes. These types of information not only improve gene identification, but they also give insights into variation in gene structure and function.

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Year:  2001        PMID： 11406390     DOI： 10.1016/s0959-440x(00)00213-x

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


  9 in total

Review 1.  Structural genomics: a pipeline for providing structures for the biologist.

Authors:  Mark R Chance; Anne R Bresnick; Stephen K Burley; Jian-Sheng Jiang; Christopher D Lima; Andrej Sali; Steven C Almo; Jeffrey B Bonanno; John A Buglino; Simon Boulton; Hua Chen; Narayanan Eswar; Guoshun He; Raymond Huang; Valentin Ilyin; Linda McMahan; Ursula Pieper; Soumya Ray; Marc Vidal; Li Kai Wang
Journal:  Protein Sci       Date:  2002-04       Impact factor: 6.725

Review 2.  Application of physiological genomics to the study of hearing disorders.

Authors:  Stefan Heller
Journal:  J Physiol       Date:  2002-08-15       Impact factor: 5.182

3.  New enzymes from environmental cassette arrays: functional attributes of a phosphotransferase and an RNA-methyltransferase.

Authors:  Blair S Nield; Robert D Willows; Andrew E Torda; Michael R Gillings; Andrew J Holmes; K M Helena Nevalainen; H W Stokes; Bridget C Mabbutt
Journal:  Protein Sci       Date:  2004-06       Impact factor: 6.725

4.  From single genes to co-expression networks: extracting knowledge from barley functional genomics.

Authors:  P Faccioli; P Provero; C Herrmann; A M Stanca; C Morcia; V Terzi
Journal:  Plant Mol Biol       Date:  2005-07       Impact factor: 4.076

5.  Computational comparison of human genomic sequence assemblies for a region of chromosome 4.

Authors:  Colin A M Semple; Stewart W Morris; David J Porteous; Kathryn L Evans
Journal:  Genome Res       Date:  2002-03       Impact factor: 9.043

6.  A proteogenomic update to Yersinia: enhancing genome annotation.

Authors:  Samuel H Payne; Shih-Ting Huang; Rembert Pieper
Journal:  BMC Genomics       Date:  2010-08-05       Impact factor: 3.969

7.  A dual-genome microarray for the pea aphid, Acyrthosiphon pisum, and its obligate bacterial symbiont, Buchnera aphidicola.

Authors:  Alex C C Wilson; Helen E Dunbar; Gregory K Davis; Wayne B Hunter; David L Stern; Nancy A Moran
Journal:  BMC Genomics       Date:  2006-03-14       Impact factor: 3.969

Review 8.  Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.

Authors:  Sima Misra; Madeline A Crosby; Christopher J Mungall; Beverley B Matthews; Kathryn S Campbell; Pavel Hradecky; Yanmei Huang; Joshua S Kaminker; Gillian H Millburn; Simon E Prochnik; Christopher D Smith; Jonathan L Tupy; Eleanor J Whitfied; Leyla Bayraktaroglu; Benjamin P Berman; Brian R Bettencourt; Susan E Celniker; Aubrey D N J de Grey; Rachel A Drysdale; Nomi L Harris; John Richter; Susan Russo; Andrew J Schroeder; Sheng Qiang Shu; Mark Stapleton; Chihiro Yamada; Michael Ashburner; William M Gelbart; Gerald M Rubin; Suzanna E Lewis
Journal:  Genome Biol       Date:  2002-12-31       Impact factor: 13.583

Review 9.  Bench-to-bedside review: fulfilling promises of the Human Genome Project.

Authors:  Jean-Daniel Chiche; Alain Cariou; Jean-Paul Mira
Journal:  Crit Care       Date:  2002-03-20       Impact factor: 9.097
  9 in total

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