Literature DB >> 11399073

Folding of beta-sheets in membranes: specificity and promiscuity in peptide model systems.

C M Bishop1, W F Walkenhorst, W C Wimley.   

Abstract

The interactions that drive the folding of beta-barrel membrane proteins have not been well studied because there have been few available model systems for membrane beta-sheets. In this work, we expand on a recently described model system to explore the contributions of interstrand hydrogen bonds, side-chain/side-chain interactions and side-chain/membrane interactions to beta-sheet formation in membranes. These experiments are based on the observation that the hydrophobic hexapeptide acetyl-Trp-Leu-Leu-Leu-Leu-Leu-OH (AcWLLLLL) folds, cooperatively and reversibly, into oligomeric, antiparallel beta-sheets in phosphatidylcholine membranes. To systematically characterize the important interactions that drive beta-sheet formation in membranes, we have used circular dichroism spectroscopy to determine the membrane secondary structure of each member of a complete host-guest family of related peptides of the form AcWLL-X-LL, where X is one of the natural amino acids. Peptides with hydrophobic X-residues of any size or character (X=Ala, Val, Ile, Leu, Cys, Met, Phe and Trp) form similar beta-sheets in membranes, while peptides with any polar X-residue or Gly or Pro at the X-position are random-coils, even when bound to membranes at high concentrations. The observed membrane sheet preferences correlate poorly with intrinsic sheet propensity scales measured in soluble proteins, but they correlate well with several membrane hydrophobicity scales. These results support the idea that the predominant interactions of the side-chains in membrane-bound beta-sheets are with the membrane lipids, and that backbone hydrogen bonding is the major driving force for the stabilization of beta-sheets in membranes. Copyright 2001 Academic Press.

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Year:  2001        PMID: 11399073     DOI: 10.1006/jmbi.2001.4715

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  17 in total

1.  Toward genomic identification of beta-barrel membrane proteins: composition and architecture of known structures.

Authors:  William C Wimley
Journal:  Protein Sci       Date:  2002-02       Impact factor: 6.725

2.  Vibrational coupling, isotopic editing, and beta-sheet structure in a membrane-bound polypeptide.

Authors:  Cynthia Paul; Jianping Wang; William C Wimley; Robin M Hochstrasser; Paul H Axelsen
Journal:  J Am Chem Soc       Date:  2004-05-12       Impact factor: 15.419

3.  Reversible unfolding of beta-sheets in membranes: a calorimetric study.

Authors:  William C Wimley; Stephen H White
Journal:  J Mol Biol       Date:  2004-09-17       Impact factor: 5.469

4.  Rational combinatorial design of pore-forming beta-sheet peptides.

Authors:  Joshua M Rausch; Jessica R Marks; William C Wimley
Journal:  Proc Natl Acad Sci U S A       Date:  2005-07-14       Impact factor: 11.205

5.  Protein folding in membranes: insights from neutron diffraction studies of a membrane beta-sheet oligomer.

Authors:  Xue Han; Kalina Hristova; William C Wimley
Journal:  Biophys J       Date:  2007-09-14       Impact factor: 4.033

Review 6.  Transmembrane β-barrels: Evolution, folding and energetics.

Authors:  Deepti Chaturvedi; Radhakrishnan Mahalakshmi
Journal:  Biochim Biophys Acta Biomembr       Date:  2017-09-22       Impact factor: 3.747

7.  Conversion of a porin-like peptide channel into a gramicidin-like channel by glycine to D-alanine substitutions.

Authors:  Jyothi Thundimadathil; Roger W Roeske; Lili Guo
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

8.  Energetics and partition of two cecropin-melittin hybrid peptides to model membranes of different composition.

Authors:  Margarida Bastos; Guangyue Bai; Paula Gomes; David Andreu; Erik Goormaghtigh; Manuel Prieto
Journal:  Biophys J       Date:  2007-11-21       Impact factor: 4.033

9.  Biomolecular engineering by combinatorial design and high-throughput screening: small, soluble peptides that permeabilize membranes.

Authors:  Ramesh Rathinakumar; William C Wimley
Journal:  J Am Chem Soc       Date:  2008-07-09       Impact factor: 15.419

10.  Synthetic molecular evolution of pore-forming peptides by iterative combinatorial library screening.

Authors:  Aram J Krauson; Jing He; Andrew W Wimley; Andrew R Hoffmann; William C Wimley
Journal:  ACS Chem Biol       Date:  2013-02-20       Impact factor: 5.100

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