Literature DB >> 11389686

Identification of novel beta-mannan- and beta-glucan-binding modules: evidence for a superfamily of carbohydrate-binding modules.

A Sunna1, M D Gibbs, P L Bergquist.   

Abstract

Many glycoside hydrolases, which degrade long-chain carbohydrate polymers, possess distinct catalytic modules and non-catalytic carbohydrate-binding modules (CBMs). On the basis of conserved protein secondary structure, we describe here the identification and experimental characterization of novel type of mannanase-associated mannan-binding module and also characterization of two CBM family 4 laminarinase-associated beta-glucan-binding modules. These modules are predicted to belong to a superfamily of CBMs which include families 4, 16, 17, 22 and a proposed new family, family 27.

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Year:  2001        PMID: 11389686      PMCID: PMC1221905          DOI: 10.1042/0264-6021:3560791

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  24 in total

1.  The thermostabilizing domain, XynA, of Caldibacillus cellulovorans xylanase is a xylan binding domain.

Authors:  A Sunna; M D Gibbs; P L Bergquist
Journal:  Biochem J       Date:  2000-03-15       Impact factor: 3.857

Review 2.  Cellulose, cellulases and cellulosomes.

Authors:  E A Bayer; H Chanzy; R Lamed; Y Shoham
Journal:  Curr Opin Struct Biol       Date:  1998-10       Impact factor: 6.809

3.  Cleavage of structural proteins during the assembly of the head of bacteriophage T4.

Authors:  U K Laemmli
Journal:  Nature       Date:  1970-08-15       Impact factor: 49.962

4.  Expression of leucine genes from an extremely thermophilic bacterium in Escherichia coli.

Authors:  J E Croft; D R Love; P L Bergquist
Journal:  Mol Gen Genet       Date:  1987-12

5.  The structural basis for the ligand specificity of family 2 carbohydrate-binding modules.

Authors:  P J Simpson; H Xie; D N Bolam; H J Gilbert; M P Williamson
Journal:  J Biol Chem       Date:  2000-12-29       Impact factor: 5.157

6.  Mannanase Man26A from Cellulomonas fimi has a mannan-binding module.

Authors:  D Stoll; A Boraston; H Stålbrand; B W McLean; D G Kilburn; R A Warren
Journal:  FEMS Microbiol Lett       Date:  2000-02-15       Impact factor: 2.742

7.  The thermostabilizing domain of the modular xylanase XynA of Thermotoga maritima represents a novel type of binding domain with affinity for soluble xylan and mixed-linkage beta-1,3/beta-1, 4-glucan.

Authors:  K Meissner; D Wassenberg; W Liebl
Journal:  Mol Microbiol       Date:  2000-05       Impact factor: 3.501

8.  The X6 "thermostabilizing" domains of xylanases are carbohydrate-binding modules: structure and biochemistry of the Clostridium thermocellum X6b domain.

Authors:  S J Charnock; D N Bolam; J P Turkenburg; H J Gilbert; L M Ferreira; G J Davies; C M Fontes
Journal:  Biochemistry       Date:  2000-05-02       Impact factor: 3.162

9.  Carbohydrate-binding modules from a thermostable Rhodothermus marinus xylanase: cloning, expression and binding studies.

Authors:  M Abou Hachem; E Nordberg Karlsson; E Bartonek-Roxâ; S Raghothama; P J Simpson; H J Gilbert; M P Williamson; O Holst
Journal:  Biochem J       Date:  2000-01-01       Impact factor: 3.857

10.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

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  11 in total

1.  Characterization of XYN10B, a modular xylanase from the ruminal protozoan Polyplastron multivesiculatum, with a family 22 carbohydrate-binding module that binds to cellulose.

Authors:  Estelle Devillard; Christel Bera-Maillet; Harry J Flint; Karen P Scott; C James Newbold; R John Wallace; Jean-Pierre Jouany; Evelyne Forano
Journal:  Biochem J       Date:  2003-07-15       Impact factor: 3.857

2.  Tetrameric structure of the GlfT2 galactofuranosyltransferase reveals a scaffold for the assembly of mycobacterial Arabinogalactan.

Authors:  Robert W Wheatley; Ruixiang Blake Zheng; Michele R Richards; Todd L Lowary; Kenneth K S Ng
Journal:  J Biol Chem       Date:  2012-06-15       Impact factor: 5.157

3.  Caldicellulosiruptor core and pangenomes reveal determinants for noncellulosomal thermophilic deconstruction of plant biomass.

Authors:  Sara E Blumer-Schuette; Richard J Giannone; Jeffrey V Zurawski; Inci Ozdemir; Qin Ma; Yanbin Yin; Ying Xu; Irina Kataeva; Farris L Poole; Michael W W Adams; Scott D Hamilton-Brehm; James G Elkins; Frank W Larimer; Miriam L Land; Loren J Hauser; Robert W Cottingham; Robert L Hettich; Robert M Kelly
Journal:  J Bacteriol       Date:  2012-05-25       Impact factor: 3.490

4.  Identification and glucan-binding properties of a new carbohydrate-binding module family.

Authors:  Alisdair B Boraston; Mazyar Ghaffari; R Antony J Warren; Douglas G Kilburn
Journal:  Biochem J       Date:  2002-01-01       Impact factor: 3.857

5.  CBM3d, a novel subfamily of family 3 carbohydrate-binding modules identified in Cel48A exoglucanase of Cellulosilyticum ruminicola.

Authors:  Shichun Cai; Xin Zheng; Xiuzhu Dong
Journal:  J Bacteriol       Date:  2011-07-29       Impact factor: 3.490

6.  Comparative characterization of deletion derivatives of the modular xylanase XynA of Thermotoga maritima.

Authors:  Jörg Kleine; Wolfgang Liebl
Journal:  Extremophiles       Date:  2006-03-21       Impact factor: 2.395

Review 7.  Carbohydrate-binding modules: fine-tuning polysaccharide recognition.

Authors:  Alisdair B Boraston; David N Bolam; Harry J Gilbert; Gideon J Davies
Journal:  Biochem J       Date:  2004-09-15       Impact factor: 3.857

8.  Cell wall regeneration in Bangia atropurpurea (Rhodophyta) protoplasts observed using a mannan-specific carbohydrate-binding module.

Authors:  Yoshiaki Umemoto; Toshiyoshi Araki
Journal:  Mar Biotechnol (NY)       Date:  2009-05-23       Impact factor: 3.619

9.  Assignment of the 1H, 13C, and 15N resonances of the 22,5 kDa CBM28 module of the cellulase Cel5I of Clostridium cellulolyticum.

Authors:  Amor Mosbah; Chantal Tardif; Olivier Bornet; Odile Valette; Bernard Henrissat; Hervé Darbon
Journal:  J Biomol NMR       Date:  2002-06       Impact factor: 2.835

10.  Novel xylan-binding properties of an engineered family 4 carbohydrate-binding module.

Authors:  Lavinia Cicortas Gunnarsson; Cedric Montanier; Richard B Tunnicliffe; Mike P Williamson; Harry J Gilbert; Eva Nordberg Karlsson; Mats Ohlin
Journal:  Biochem J       Date:  2007-09-01       Impact factor: 3.857

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