Literature DB >> 11377773

Diversity among three novel groups of hyperthermophilic deep-sea Thermococcus species from three sites in the northeastern Pacific Ocean.

J F. Holden1, K Takai, M Summit, S Bolton, J Zyskowski, J A. Baross.   

Abstract

Eight new strains of deep-sea hyperthermophilic sulfur reducers were isolated from hydrothermal vent fields at 9 degrees 50'N East Pacific Rise (EPR) and at the Cleft and CoAxial segments along the Juan de Fuca Ridge (JdFR). 16S rRNA gene sequence analysis showed that each strain belongs to the genus Thermococcus. Restriction fragment length polymorphism patterns of the 16S/23S rRNA intergenic spacer region revealed that these isolates fell into three groups: those from the EPR, those from fluid and rock sources on the JdFR, and those isolated from Paralvinella spp. polychaete vent worms from the JdFR. The optimum-temperature specific growth rates and the temperature ranges for growth were significantly higher and broader for those strains isolated from worms relative to those isolated from low-temperature diffuse hydrothermal fluids. Furthermore, the worm-derived isolates generally produced a larger array of proteases and amylases based on zymogram analyses. The zymogram patterns also changed with growth temperature suggesting that these organisms alter their lytic protein suites in response to changes in temperature. This study suggests that there is significant phenotypic diversity in Thermococcus that is not apparent from their highly conserved 16S rRNA nucleotide sequences.

Entities:  

Year:  2001        PMID: 11377773     DOI: 10.1111/j.1574-6941.2001.tb00825.x

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  32 in total

1.  Enrichment and proteome analysis of a hyperthermostable protein set of archaeon Thermococcus onnurineus NA1.

Authors:  Sung-Ho Yun; Chi-Won Choi; Sang Oh Kwon; Yeol Gyun Lee; Young-Ho Chung; Hoi Jong Jung; Yun-Jae Kim; Jung-Hyun Lee; Jong-Soon Choi; Soohyun Kim; Seung Il Kim
Journal:  Extremophiles       Date:  2011-04-23       Impact factor: 2.395

2.  Analysis of dissimilatory sulfite reductase and 16S rRNA gene fragments from deep-sea hydrothermal sites of the Suiyo Seamount, Izu-Bonin Arc, Western Pacific.

Authors:  Tatsunori Nakagawa; Jun-Ichiro Ishibashi; Akihiko Maruyama; Toshiro Yamanaka; Yusuke Morimoto; Hiroyuki Kimura; Tetsuro Urabe; Manabu Fukui
Journal:  Appl Environ Microbiol       Date:  2004-01       Impact factor: 4.792

3.  Culturable Rhodobacter and Shewanella species are abundant in estuarine turbidity maxima of the Columbia River.

Authors:  S L Bräuer; C Adams; K Kranzler; D Murphy; M Xu; P Zuber; H M Simon; A M Baptista; B M Tebo
Journal:  Environ Microbiol       Date:  2010-10-26       Impact factor: 5.491

4.  Proteomic characterization of the sulfur-reducing hyperthermophilic archaeon Thermococcus onnurineus NA1 by 2-DE/MS-MS.

Authors:  Sang Oh Kwon; Sung Gyun Kang; Soon-Ho Park; Young Hwan Kim; Jong-Soon Choi; Jung-Hyun Lee; Seung Il Kim
Journal:  Extremophiles       Date:  2009-01-09       Impact factor: 2.395

5.  Abundances of hyperthermophilic autotrophic Fe(III) oxide reducers and heterotrophs in hydrothermal sulfide chimneys of the northeastern Pacific Ocean.

Authors:  Helene C Ver Eecke; Deborah S Kelley; James F Holden
Journal:  Appl Environ Microbiol       Date:  2008-10-31       Impact factor: 4.792

6.  Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomes.

Authors:  Toshiaki Fukui; Haruyuki Atomi; Tamotsu Kanai; Rie Matsumi; Shinsuke Fujiwara; Tadayuki Imanaka
Journal:  Genome Res       Date:  2005-02-14       Impact factor: 9.043

7.  A molecular and physiological survey of a diverse collection of hydrothermal vent Thermococcus and Pyrococcus isolates.

Authors:  Andreas Teske; Virginia Edgcomb; Adam R Rivers; Janelle R Thompson; Alvin de Vera Gomez; Stephen J Molyneaux; Carl O Wirsen
Journal:  Extremophiles       Date:  2009-09-11       Impact factor: 2.395

8.  Targeted gene disruption by homologous recombination in the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1.

Authors:  Takaaki Sato; Toshiaki Fukui; Haruyuki Atomi; Tadayuki Imanaka
Journal:  J Bacteriol       Date:  2003-01       Impact factor: 3.490

9.  A novel CO-responsive transcriptional regulator and enhanced H2 production by an engineered Thermococcus onnurineus NA1 strain.

Authors:  Min-Sik Kim; Ae Ran Choi; Seong Hyuk Lee; Hae-Chang Jung; Seung Seob Bae; Tae-Jun Yang; Jeong Ho Jeon; Jae Kyu Lim; Hwan Youn; Tae Wan Kim; Hyun Sook Lee; Sung Gyun Kang
Journal:  Appl Environ Microbiol       Date:  2014-12-29       Impact factor: 4.792

Review 10.  Multifactorial level of extremostability of proteins: can they be exploited for protein engineering?

Authors:  Debamitra Chakravorty; Mohd Faheem Khan; Sanjukta Patra
Journal:  Extremophiles       Date:  2017-03-10       Impact factor: 2.395

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