Literature DB >> 11371448

Markovian models of low and high activity levels of cardiac ryanodine receptors.

E Saftenku1, A J Williams, R Sitsapesan.   

Abstract

The modal gating behavior of single sheep cardiac sarcoplasmic reticulum (SR) Ca2+-release/ryanodine receptor (RyR) channels was assessed. We find that the gating of RyR channels spontaneously shifts between high (H) and low (L) levels of activity and inactive periods where no channel openings are detected (I). Moreover, we find that there is evidence for multiple gating modes within H activity, which we term H1 and H2 mode. Our results demonstrate that the underlying mechanisms regulating gating are similar in native and purified channels. Dwell-time distributions of L activity were best fitted by three open and five closed significant exponential components whereas dwell-time distributions of H1 activity were best fitted by two to three open and four closed significant exponential components. Increases in cytosolic [Ca2+] cause an increase in open probability (Po) within L activity and an increase in the probability of occurrence of H activity. Open lifetime distributions within L activity were Ca2+ independent whereas open lifetime distributions within H activity were Ca2+ dependent. This study is the first attempt to estimate RyR single-channel kinetic parameters from sequences of idealized dwell-times and to develop kinetic models of RyR gating using the criterion of maximum likelihood. We propose distinct kinetic schemes for L, H1, and H2 activity that describe the major features of sheep cardiac RyR channel gating at these levels of activity.

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Year:  2001        PMID: 11371448      PMCID: PMC1301459          DOI: 10.1016/S0006-3495(01)76241-8

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  30 in total

1.  Ca2+ activation and Ca2+ inactivation of canine reconstituted cardiac sarcoplasmic reticulum Ca(2+)-release channels.

Authors:  A Schiefer; G Meissner; G Isenberg
Journal:  J Physiol       Date:  1995-12-01       Impact factor: 5.182

2.  Estimating single-channel kinetic parameters from idealized patch-clamp data containing missed events.

Authors:  F Qin; A Auerbach; F Sachs
Journal:  Biophys J       Date:  1996-01       Impact factor: 4.033

3.  Inactivation of Ca2+ release channels (ryanodine receptors RyR1 and RyR2) with rapid steps in [Ca2+] and voltage.

Authors:  D R Laver; G D Lamb
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

4.  Heterogeneity of Ca2+ gating of skeletal muscle and cardiac ryanodine receptors.

Authors:  J A Copello; S Barg; H Onoue; S Fleischer
Journal:  Biophys J       Date:  1997-07       Impact factor: 4.033

5.  Ryanodine receptor adaptation and Ca2+(-)induced Ca2+ release-dependent Ca2+ oscillations.

Authors:  J Keizer; L Levine
Journal:  Biophys J       Date:  1996-12       Impact factor: 4.033

6.  Maximum likelihood estimation of aggregated Markov processes.

Authors:  F Qin; A Auerbach; F Sachs
Journal:  Proc Biol Sci       Date:  1997-03-22       Impact factor: 5.349

7.  Description of modal gating of the cardiac calcium release channel in planar lipid membranes.

Authors:  A Zahradníková; I Zahradník
Journal:  Biophys J       Date:  1995-11       Impact factor: 4.033

8.  Local control models of cardiac excitation-contraction coupling. A possible role for allosteric interactions between ryanodine receptors.

Authors:  M D Stern; L S Song; H Cheng; J S Sham; H T Yang; K R Boheler; E Ríos
Journal:  J Gen Physiol       Date:  1999-03       Impact factor: 4.086

9.  Response of ryanodine receptor channels to Ca2+ steps produced by rapid solution exchange.

Authors:  D R Laver; B A Curtis
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

10.  Ca2+ spark termination: inactivation and adaptation may be manifestations of the same mechanism.

Authors:  S Györke
Journal:  J Gen Physiol       Date:  1999-07       Impact factor: 4.086

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  18 in total

1.  Ca²+-dependent phosphorylation of RyR2 can uncouple channel gating from direct cytosolic Ca²+ regulation.

Authors:  Simon Carter; Samantha J Pitt; John Colyer; Rebecca Sitsapesan
Journal:  J Membr Biol       Date:  2011-01-28       Impact factor: 1.843

2.  Mechanisms of excitation-contraction coupling in an integrative model of the cardiac ventricular myocyte.

Authors:  Joseph L Greenstein; Robert Hinch; Raimond L Winslow
Journal:  Biophys J       Date:  2005-10-07       Impact factor: 4.033

3.  Single channel analysis reveals different modes of Kv1.5 gating behavior regulated by changes of external pH.

Authors:  Daniel C H Kwan; David Fedida; Steven J Kehl
Journal:  Biophys J       Date:  2005-12-02       Impact factor: 4.033

4.  A 3D Monte Carlo analysis of the role of dyadic space geometry in spark generation.

Authors:  Xiaoying Koh; Bhuvan Srinivasan; Hwee Seong Ching; Andre Levchenko
Journal:  Biophys J       Date:  2005-12-30       Impact factor: 4.033

5.  Mode switching is the major mechanism of ligand regulation of InsP3 receptor calcium release channels.

Authors:  Lucian Ionescu; Carl White; King-Ho Cheung; Jianwei Shuai; Ian Parker; John E Pearson; J Kevin Foskett; Don-On Daniel Mak
Journal:  J Gen Physiol       Date:  2007-11-12       Impact factor: 4.086

6.  TPC2 is a novel NAADP-sensitive Ca2+ release channel, operating as a dual sensor of luminal pH and Ca2+.

Authors:  Samantha J Pitt; Tim M Funnell; Mano Sitsapesan; Elisa Venturi; Katja Rietdorf; Margarida Ruas; A Ganesan; Rajendra Gosain; Grant C Churchill; Michael X Zhu; John Parrington; Antony Galione; Rebecca Sitsapesan
Journal:  J Biol Chem       Date:  2010-08-18       Impact factor: 5.157

7.  Calcium regulation of single ryanodine receptor channel gating analyzed using HMM/MCMC statistical methods.

Authors:  Rafael A Rosales; Michael Fill; Ariel L Escobar
Journal:  J Gen Physiol       Date:  2004-05       Impact factor: 4.086

8.  Ca(2+)-calmodulin can activate and inactivate cardiac ryanodine receptors.

Authors:  C Sigalas; S Bent; A Kitmitto; S O'Neill; R Sitsapesan
Journal:  Br J Pharmacol       Date:  2009-02-03       Impact factor: 8.739

9.  Ryanodine receptor luminal Ca2+ regulation: swapping calsequestrin and channel isoforms.

Authors:  Jia Qin; Giorgia Valle; Alma Nani; Haiyan Chen; Josefina Ramos-Franco; Alessandra Nori; Pompeo Volpe; Michael Fill
Journal:  Biophys J       Date:  2009-10-07       Impact factor: 4.033

10.  Flux regulation of cardiac ryanodine receptor channels.

Authors:  Yiwei Liu; Maura Porta; Jia Qin; Jorge Ramos; Alma Nani; Thomas R Shannon; Michael Fill
Journal:  J Gen Physiol       Date:  2009-12-14       Impact factor: 4.086

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