Literature DB >> 11335019

Birth and death of duplicated genes in completely sequenced eukaryotes.

A Wagner1.   

Abstract

Gene and genome duplications are commonly regarded as being of major evolutionary significance. But how often does gene duplication occur? And, once duplicated, what are the fates of duplicated genes? How do they contribute to evolution? In a recent article, Lynch and Conery analyze divergence between duplicate genes from six eukaryotic genomes. They estimate the rate of gene duplication, the rate of gene loss after duplication and the strength of selection experienced by duplicate genes. They conclude that although the rate of gene duplications is high, so is the rate of gene loss, and they argue that gene duplications could be a major factor in speciation.

Mesh:

Year:  2001        PMID: 11335019     DOI: 10.1016/s0168-9525(01)02243-0

Source DB:  PubMed          Journal:  Trends Genet        ISSN: 0168-9525            Impact factor:   11.639


  28 in total

1.  Different types and rates of genome evolution detected by comparative sequence analysis of orthologous segments from four cereal genomes.

Authors:  Wusirika Ramakrishna; Jorge Dubcovsky; Yong-Jin Park; Carlos Busso; John Emberton; Phillip SanMiguel; Jeffrey L Bennetzen
Journal:  Genetics       Date:  2002-11       Impact factor: 4.562

2.  Excess non-synonymous substitutions suggest that positive selection episodes occurred during the evolution of DNA-binding domains in the Arabidopsis R2R3-MYB gene family.

Authors:  Li Jia; Michael T Clegg; Tao Jiang
Journal:  Plant Mol Biol       Date:  2003-06       Impact factor: 4.076

3.  Simulating evolution by gene duplication of protein features that require multiple amino acid residues.

Authors:  Michael J Behe; David W Snoke
Journal:  Protein Sci       Date:  2004-08-31       Impact factor: 6.725

4.  Convergent evolution of gene networks by single-gene duplications in higher eukaryotes.

Authors:  Gregory D Amoutzias; David L Robertson; Stephen G Oliver; Erich Bornberg-Bauer
Journal:  EMBO Rep       Date:  2004-02-13       Impact factor: 8.807

5.  The effect of functional compensation among duplicate genes can constrain their evolutionary divergence.

Authors:  Joseph Esfandiar Hannon Bozorgmehr
Journal:  J Genet       Date:  2012       Impact factor: 1.166

6.  The origin of subfunctions and modular gene regulation.

Authors:  Allan Force; William A Cresko; F Bryan Pickett; Steven R Proulx; Chris Amemiya; Michael Lynch
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

7.  Molecular adaptation in plant hemoglobin, a duplicated gene involved in plant-bacteria symbiosis.

Authors:  Emilie Guldner; Bernard Godelle; Nicolas Galtier
Journal:  J Mol Evol       Date:  2004-09       Impact factor: 2.395

8.  Genomic organization of the sex-determining and adjacent regions of the sex chromosomes of medaka.

Authors:  Mariko Kondo; Ute Hornung; Indrajit Nanda; Shuichiro Imai; Takashi Sasaki; Atsushi Shimizu; Shuichi Asakawa; Hiroshi Hori; Michael Schmid; Nobuyoshi Shimizu; Manfred Schartl
Journal:  Genome Res       Date:  2006-06-02       Impact factor: 9.043

9.  After the duplication: gene loss and adaptation in Saccharomyces genomes.

Authors:  Paul F Cliften; Robert S Fulton; Richard K Wilson; Mark Johnston
Journal:  Genetics       Date:  2005-12-01       Impact factor: 4.562

10.  Differential evolution of the Saccharomyces cerevisiae DUP240 paralogs and implication of recombination in phylogeny.

Authors:  V Leh-Louis; B Wirth; L Despons; S Wain-Hobson; S Potier; J L Souciet
Journal:  Nucleic Acids Res       Date:  2004-04-15       Impact factor: 16.971

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