Literature DB >> 11325050

Chromosome evolution in the Salmonidae (Pisces): an update.

R Phillips1, P Ráb.   

Abstract

The karyotypes of salmonid fishes including taxa in the three subfamilies Coregoninae, Thymallinae and Salmoninae are described. This review is an update of the (Hartley, 1987) review of the chromosomes of salmonid fishes. As described in the previous review, the karyotypes of salmonid fishes fall into two main categories based on chromosome numbers: the type A karyotypes have diploid numbers close to 80 with approximately 100 chromosome arms (2n = 80, NF = 100), and the type B karyotypes have diploid numbers close to 60 with approximately 100 chromosome arms (2n = 60, NF = 100). In this paper we have proposed additional sub categories based on variation in the number of chromosome arms: the A' type with NF = 110-120, the A" type with NF greater than 140, and the B' type with NF less than 80. Two modes of chromosome evolution are found in the salmonids: in the Coregoninae and the Salmoninae the chromosomes have evolved by centric fusions of the Robertsonian type decreasing chromosome numbers (2n) while retaining chromosome arm numbers (NF) close to that found in the hypothetical tetraploid ancestor so that most extant taxa have either type A or type B karyotypes. In the Thymallinae, the chromosomes have evolved by inversions so that chromosome arm numbers (NF) have increased but chromosome numbers (2n) close to the karyotype of the hypothetical tetraploid ancestor have been retained and all taxa have type A' karyotypes. Most of the taxa with type B karyotypes in the Coregoninae and Salmoninae are members of the genus Oncorhynchus, although at least one example of type B karyotypes is found in all of the other genera. These taxa either have an anadromous life history or are found in specialized lacustrine environments. Selection for increases or decreases in genetic recombination as proposed by Qumsiyeh, 1994 could have been involved in the evolution of chromosome number in salmonid fishes.

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Year:  2001        PMID: 11325050     DOI: 10.1017/s1464793100005613

Source DB:  PubMed          Journal:  Biol Rev Camb Philos Soc        ISSN: 0006-3231


  80 in total

1.  Linkage maps of the dwarf and Normal lake whitefish (Coregonus clupeaformis) species complex and their hybrids reveal the genetic architecture of population divergence.

Authors:  S M Rogers; N Isabel; L Bernatchez
Journal:  Genetics       Date:  2006-11-16       Impact factor: 4.562

2.  Assignment of rainbow trout linkage groups to specific chromosomes.

Authors:  Ruth B Phillips; Krista M Nichols; Jenefer J DeKoning; Matthew R Morasch; Kimberly A Keatley; Caird Rexroad; Scott A Gahr; Roy G Danzmann; Robert E Drew; Gary H Thorgaard
Journal:  Genetics       Date:  2006-09-01       Impact factor: 4.562

3.  Mapping of rRNA genes and telomeric sequences in Danube salmon (Hucho hucho) chromosomes using primed in situ labeling technique (PRINS).

Authors:  K Ocalewicz; P Woznicki; M Jankun
Journal:  Genetica       Date:  2007-11-24       Impact factor: 1.082

4.  Pervasive sex-linked effects on transcription regulation as revealed by expression quantitative trait loci mapping in lake whitefish species pairs (Coregonus sp., Salmonidae).

Authors:  N Derome; B Bougas; S M Rogers; A R Whiteley; A Labbe; J Laroche; L Bernatchez
Journal:  Genetics       Date:  2008-07-27       Impact factor: 4.562

5.  Evolution of Hox clusters in Salmonidae: a comparative analysis between Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss).

Authors:  Hooman K Moghadam; Moira M Ferguson; Roy G Danzmann
Journal:  J Mol Evol       Date:  2005-09-30       Impact factor: 2.395

6.  Gene duplication, gene loss and evolution of expression domains in the vertebrate nuclear receptor NR5A (Ftz-F1) family.

Authors:  Ming-Wei Kuo; John Postlethwait; Wen-Chih Lee; Show-Wan Lou; Woon-Khiong Chan; Bon-chu Chung
Journal:  Biochem J       Date:  2005-07-01       Impact factor: 3.857

7.  Distribution of temperature tolerance quantitative trait loci in Arctic charr (Salvelinus alpinus) and inferred homologies in rainbow trout (Oncorhynchus mykiss).

Authors:  Ildiko M L Somorjai; Roy G Danzmann; Moira M Ferguson
Journal:  Genetics       Date:  2003-11       Impact factor: 4.562

8.  Salmo salar and Esox lucius full-length cDNA sequences reveal changes in evolutionary pressures on a post-tetraploidization genome.

Authors:  Jong S Leong; Stuart G Jantzen; Kristian R von Schalburg; Glenn A Cooper; Amber M Messmer; Nancy Y Liao; Sarah Munro; Richard Moore; Robert A Holt; Steven J M Jones; William S Davidson; Ben F Koop
Journal:  BMC Genomics       Date:  2010-04-30       Impact factor: 3.969

9.  Comparative genomic analysis of Atlantic salmon, Salmo salar, from Europe and North America.

Authors:  Krzysztof P Lubieniecki; Stacy L Jones; Evelyn A Davidson; Jay Park; Ben F Koop; Seumas Walker; William S Davidson
Journal:  BMC Genet       Date:  2010-11-23       Impact factor: 2.797

10.  Comparative genomics and evolution of conserved noncoding elements (CNE) in rainbow trout.

Authors:  Hooman K Moghadam; Moira M Ferguson; Roy G Danzmann
Journal:  BMC Genomics       Date:  2009-06-23       Impact factor: 3.969

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