Literature DB >> 11320307

Structure of cytochrome c7 from Desulfuromonas acetoxidans at 1.9 A resolution.

M Czjzek1, P Arnoux, R Haser, W Shepard.   

Abstract

Multihaem cytochromes play a key role in electron-transport reactions in the periplasm of sulfate- and sulfur-reducing bacteria. The redox proteins grouped in the c3 superfamily also display metal-reducing activities, which make them interesting biotechnological tools. The crystal structure of the fully oxidized cytochrome c7 from Desulfuromonas acetoxidans has been solved by combined molecular-replacement and MAD methods. The structure has been refined at 1.9 A resolution to an R value of 19.1% (R(free) = 24.3%) and includes three haems and 116 water molecules. The protein displays the cytochrome c3 fold in a highly minimized form, while haem 2 and the surrounding protein environment are missing. The geometry of haem packing and of the haem axial ligands and propionates are described and compared with that of c3 cytochromes. The crystal structure is compared with the solution structure recently obtained by NMR methods and with its homologue cytochromes of the c3 superfamily. Comparison of the high number of available structures makes it possible to analyze the structural role of the few highly conserved residues, in addition to the cysteines and histidines that link the porphyrin rings and the Fe atoms to the protein chain.

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Year:  2001        PMID: 11320307     DOI: 10.1107/s0907444901003481

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


  9 in total

1.  A use of Ramachandran potentials in protein solution structure determinations.

Authors:  Ivano Bertini; Gabriele Cavallaro; Claudio Luchinat; Irene Poli
Journal:  J Biomol NMR       Date:  2003-08       Impact factor: 2.835

Review 2.  Proton thrusters: overview of the structural and functional features of soluble tetrahaem cytochromes c3.

Authors:  Ricardo O Louro
Journal:  J Biol Inorg Chem       Date:  2006-09-09       Impact factor: 3.358

Review 3.  Metalloproteins containing cytochrome, iron-sulfur, or copper redox centers.

Authors:  Jing Liu; Saumen Chakraborty; Parisa Hosseinzadeh; Yang Yu; Shiliang Tian; Igor Petrik; Ambika Bhagi; Yi Lu
Journal:  Chem Rev       Date:  2014-04-23       Impact factor: 60.622

4.  A quick solution structure determination of the fully oxidized double mutant K9-10A cytochrome c7 from Desulfuromonas acetoxidans and mechanistic implications.

Authors:  Michael Assfalg; Ivano Bertini; Paola Turano; Mireille Bruschi; Marie-Claire Durand; Marie-Thérèse Giudici-Orticoni; Alain Dolla
Journal:  J Biomol NMR       Date:  2002-02       Impact factor: 2.835

5.  Pitfalls in the interpretation of structural changes in mutant proteins from crystal structures.

Authors:  P R Pokkuluri; X Yang; Y Y Londer; M Schiffer
Journal:  J Struct Funct Genomics       Date:  2012-10-26

6.  Biochemical and genetic characterization of PpcA, a periplasmic c-type cytochrome in Geobacter sulfurreducens.

Authors:  Jon R Lloyd; Ching Leang; Allison L Hodges Myerson; Maddalena V Coppi; Stacey Cuifo; Barb Methe; Steven J Sandler; Derek R Lovley
Journal:  Biochem J       Date:  2003-01-01       Impact factor: 3.857

7.  The metal reductase activity of some multiheme cytochromes c: NMR structural characterization of the reduction of chromium(VI) to chromium(III) by cytochrome c(7).

Authors:  Michael Assfalg; Ivano Bertini; Mireille Bruschi; Caroline Michel; Paola Turano
Journal:  Proc Natl Acad Sci U S A       Date:  2002-07-15       Impact factor: 11.205

8.  Importance of c-Type cytochromes for U(VI) reduction by Geobacter sulfurreducens.

Authors:  Evgenya S Shelobolina; Maddalena V Coppi; Anton A Korenevsky; Laurie N DiDonato; Sara A Sullivan; Hiromi Konishi; Huifang Xu; Ching Leang; Jessica E Butler; Byoung-Chan Kim; Derek R Lovley
Journal:  BMC Microbiol       Date:  2007-03-08       Impact factor: 3.605

9.  NCS-constrained exhaustive search using oligomeric models.

Authors:  Michail N Isupov; Andrey A Lebedev
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2007-12-05
  9 in total

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