Literature DB >> 11320079

On the role of conserved histidine 106 in 10-formyltetrahydrofolate dehydrogenase catalysis: connection between hydrolase and dehydrogenase mechanisms.

S A Krupenko1, A P Vlasov, C Wagner.   

Abstract

The enzyme, 10-formyltetrahydrofolate dehydrogenase (FDH), converts 10-formyltetrahydrofolate (10-formyl-THF) to tetrahydrofolate in an NADP(+)-dependent dehydrogenase reaction or an NADP(+)-independent hydrolase reaction. The hydrolase reaction occurs in a 310-amino acid long amino-terminal domain of FDH (N(t)-FDH), whereas the dehydrogenase reaction requires the full-length enzyme. The amino-terminal domain of FDH shares some sequence identity with several other enzymes utilizing 10-formyl-THF as a substrate. These enzymes have two strictly conserved residues, aspartate and histidine, in the putative catalytic center. We have shown recently that the conserved aspartate is involved in FDH catalysis. In the present work we studied the role of the conserved histidine, His(106), in FDH function. Site-directed mutagenesis experiments showed that replacement of the histidine with alanine, asparagine, aspartate, glutamate, glutamine, or arginine in N(t)-FDH resulted in expression of insoluble proteins. Replacement of the histidine with another positively charged residue, lysine, produced a soluble mutant with no hydrolase activity. The insoluble mutants refolded from inclusion bodies adopted a conformation inherent to the wild-type N(t)-FDH, but they did not exhibit any hydrolase activity. Substitution of alanine for three non-conserved histidines located close to the conserved one did not reveal any significant changes in the hydrolase activity of N(t)-FDH. Expressed full-length FDH with the substitution of lysine for the His(106) completely lost both the hydrolase and dehydrogenase activities. Thus, our study showed that His(106), besides being an important structural residue, is also directly involved in both the hydrolase and dehydrogenase mechanisms of FDH. Modeling of the putative hydrolase catalytic center/folate-binding site suggested that the catalytic residues, aspartate and histidine, are unlikely to be adjacent to the catalytic cysteine in the aldehyde dehydrogenase catalytic center. We hypothesize that 10-formyl-THF dehydrogenase reaction is not an independent reaction but is a combination of hydrolase and aldehyde dehydrogenase reactions.

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Year:  2001        PMID: 11320079     DOI: 10.1074/jbc.M009257200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  9 in total

1.  Enzymatic properties of ALDH1L2, a mitochondrial 10-formyltetrahydrofolate dehydrogenase.

Authors:  Kyle C Strickland; Natalia I Krupenko; Marianne E Dubard; Calvin J Hu; Yaroslav Tsybovsky; Sergey A Krupenko
Journal:  Chem Biol Interact       Date:  2011-01-14       Impact factor: 5.192

Review 2.  Mass Spectrometry-Based Protein Footprinting for Higher-Order Structure Analysis: Fundamentals and Applications.

Authors:  Xiaoran Roger Liu; Mengru Mira Zhang; Michael L Gross
Journal:  Chem Rev       Date:  2020-04-22       Impact factor: 60.622

3.  Modular organization of FDH: Exploring the basis of hydrolase catalysis.

Authors:  Steven N Reuland; Alexander P Vlasov; Sergey A Krupenko
Journal:  Protein Sci       Date:  2006-04-05       Impact factor: 6.725

4.  CO synthesized from the central one-carbon pool as source for the iron carbonyl in O2-tolerant [NiFe]-hydrogenase.

Authors:  Ingmar Bürstel; Elisabeth Siebert; Stefan Frielingsdorf; Ingo Zebger; Bärbel Friedrich; Oliver Lenz
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-05       Impact factor: 11.205

5.  ALDH1L2 is the mitochondrial homolog of 10-formyltetrahydrofolate dehydrogenase.

Authors:  Natalia I Krupenko; Marianne E Dubard; Kyle C Strickland; Kelly M Moxley; Natalia V Oleinik; Sergey A Krupenko
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

6.  Modeling of interactions between functional domains of ALDH1L1.

Authors:  David A Horita; Sergey A Krupenko
Journal:  Chem Biol Interact       Date:  2017-04-14       Impact factor: 5.192

Review 7.  FDH: an aldehyde dehydrogenase fusion enzyme in folate metabolism.

Authors:  Sergey A Krupenko
Journal:  Chem Biol Interact       Date:  2008-09-19       Impact factor: 5.192

8.  Structures of the hydrolase domain of zebrafish 10-formyltetrahydrofolate dehydrogenase and its complexes reveal a complete set of key residues for hydrolysis and product inhibition.

Authors:  Chien-Chih Lin; Phimonphan Chuankhayan; Wen-Ni Chang; Tseng-Ting Kao; Hong-Hsiang Guan; Hoong-Kun Fun; Atsushi Nakagawa; Tzu-Fun Fu; Chun-Jung Chen
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2015-03-27

9.  Structure of putative tumor suppressor ALDH1L1.

Authors:  Yaroslav Tsybovsky; Valentin Sereda; Marcin Golczak; Natalia I Krupenko; Sergey A Krupenko
Journal:  Commun Biol       Date:  2022-01-10
  9 in total

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