Literature DB >> 11318641

Electron transfer in the substrate-dependent suicide inactivation of lysine 5,6-aminomutase.

K H Tang1, C H Chang, P A Frey.   

Abstract

The lysine 5,6-aminomutase (5,6-LAM) purified from Clostridium sticklandii was found to undergo rapid inactivation in the absence of the activating enzyme E(2) and ATP. In the presence of substrate, inactivation was also seen for the recombinant 5,6-LAM. This adenosylcobalamin-dependent enzyme is postulated to generate cob(II)alamin and the 5'-deoxyadenosyl radical through enzyme-induced homolytic scission of the Co-C bond. However, the products cob(III)alamin and 5'-deoxyadenosine were observed upon inactivation of 5,6-LAM. Cob(III)alamin production, as monitored by the increase in A(358), proceeds at the same rate as the loss of enzyme activity, suggesting that the activity loss is related to the adventitious generation of cob(III)alamin during enzymatic turnover. The cleavage of adenosylcobalamin to cob(III)alamin is accompanied by the formation of 5'-deoxyadenosine at the same rate, and the generation of cob(III)alamin proceeds at the same rate both aerobically and anaerobically. Suicide inactivation requires the presence of substrate, adenosylcobalamin, and PLP. We have ruled out the involvement of either the putative 5'-deoxyadenosyl radical or dioxygen in suicide inactivation. We have shown that one or more reaction intermediates derived from the substrate or/and the product, presumably a radical, participate in suicide inactivation of 5,6-LAM through electron transfer from cob(II)alamin. Moreover, L-lysine is found to be a slowly reacting substrate, and it induces inactivation at a rate similar to that of D-lysine. The alternative substrate beta-lysine induces inactivation at least 25 times faster than DL-lysine. The inactivation mechanism is compatible with the radical isomerization mechanism proposed to explain the action of 5,6-LAM.

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Year:  2001        PMID: 11318641     DOI: 10.1021/bi010157j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  13 in total

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Authors:  Valentin Cracan; Ruma Banerjee
Journal:  J Biol Chem       Date:  2011-12-13       Impact factor: 5.157

Review 2.  The positions of radical intermediates in the active sites of adenosylcobalamin-dependent enzymes.

Authors:  George H Reed; Steven O Mansoorabadi
Journal:  Curr Opin Struct Biol       Date:  2003-12       Impact factor: 6.809

3.  Glutamate 2,3-aminomutase: a new member of the radical SAM superfamily of enzymes.

Authors:  Frank J Ruzicka; Perry A Frey
Journal:  Biochim Biophys Acta       Date:  2006-11-23

4.  Radical triplets and suicide inhibition in reactions of 4-thia-D- and 4-thia-L-lysine with lysine 5,6-aminomutase.

Authors:  Kuo-Hsiang Tang; Steven O Mansoorabadi; George H Reed; Perry A Frey
Journal:  Biochemistry       Date:  2009-09-01       Impact factor: 3.162

5.  Reaction of the Co(II)-substrate radical pair catalytic intermediate in coenzyme B12-dependent ethanolamine ammonia-lyase in frozen aqueous solution from 190 to 217 K.

Authors:  Chen Zhu; Kurt Warncke
Journal:  Biophys J       Date:  2008-09-19       Impact factor: 4.033

6.  Temperature shift effect on the Chlorobaculum tepidum chlorosomes.

Authors:  Joseph Kuo-Hsiang Tang; Ying Xu; Guillermo M Muhlmann; Farrokh Zare; Yadana Khin; Sun W Tam
Journal:  Photosynth Res       Date:  2013-02-23       Impact factor: 3.573

7.  Alternative pathways for radical dissipation in an active site mutant of B12-dependent methylmalonyl-CoA mutase.

Authors:  Dominique Padovani; Ruma Banerjee
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

8.  Kinetic and spectroscopic evidence of negative cooperativity in the action of lysine 2,3-aminomutase.

Authors:  Frank J Ruzicka; Perry A Frey
Journal:  J Phys Chem B       Date:  2010-07-07       Impact factor: 2.991

9.  A locking mechanism preventing radical damage in the absence of substrate, as revealed by the x-ray structure of lysine 5,6-aminomutase.

Authors:  Frederick Berkovitch; Elham Behshad; Kuo-Hsiang Tang; Eva A Enns; Perry A Frey; Catherine L Drennan
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-28       Impact factor: 11.205

10.  Dioldehydrase: an essential role for potassium ion in the homolytic cleavage of the cobalt-carbon bond in adenosylcobalamin.

Authors:  Phillip A Schwartz; Perry A Frey
Journal:  Biochemistry       Date:  2007-05-22       Impact factor: 3.162

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