Literature DB >> 11311228

Local DNA demethylation in vertebrates: how could it be performed and targeted?

C Kress1, H Thomassin, T Grange.   

Abstract

In vertebrates, cytosine methylation is an epigenetic DNA modification that participates in genome stability and gene repression. Methylation patterns are either maintained throughout cell division, or modified by global or local de novo methylation and demethylation. Site-specific demethylation is a rather elusive process that occurs mainly in parallel to gene activation during development. In light of our studies of the glucocorticoid-dependent DNA demethylation of the tyrosine aminotransferase gene, we discuss the potential biochemical mechanisms allowing DNA demethylation and its targeting to specific sequences by transcription factors as well as possible links to DNA replication and chromatin remodelling.

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Year:  2001        PMID: 11311228     DOI: 10.1016/s0014-5793(01)02328-6

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  28 in total

1.  5-Methylcytosine DNA glycosylase participates in the genome-wide loss of DNA methylation occurring during mouse myoblast differentiation.

Authors:  J P Jost; E J Oakeley; B Zhu; D Benjamin; S Thiry; M Siegmann; Y C Jost
Journal:  Nucleic Acids Res       Date:  2001-11-01       Impact factor: 16.971

2.  DEMETER and REPRESSOR OF SILENCING 1 encode 5-methylcytosine DNA glycosylases.

Authors:  Teresa Morales-Ruiz; Ana Pilar Ortega-Galisteo; María Isabel Ponferrada-Marín; María Isabel Martínez-Macías; Rafael R Ariza; Teresa Roldán-Arjona
Journal:  Proc Natl Acad Sci U S A       Date:  2006-04-19       Impact factor: 11.205

Review 3.  Chromatin dynamics and Arabidopsis development.

Authors:  Frédéric Berger; Valérie Gaudin
Journal:  Chromosome Res       Date:  2003       Impact factor: 5.239

4.  MethylQuant: a sensitive method for quantifying methylation of specific cytosines within the genome.

Authors:  Hélène Thomassin; Clémence Kress; Thierry Grange
Journal:  Nucleic Acids Res       Date:  2004-12-02       Impact factor: 16.971

Review 5.  Statistical signals in bioinformatics.

Authors:  Samuel Karlin
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-12       Impact factor: 11.205

6.  A SNF2-like protein facilitates dynamic control of DNA methylation.

Authors:  Tatsuo Kanno; Werner Aufsatz; Estelle Jaligot; Michael Florian Mette; Marjori Matzke; Antonius J M Matzke
Journal:  EMBO Rep       Date:  2005-07       Impact factor: 8.807

7.  GADD45A protein plays an essential role in active DNA demethylation during terminal osteogenic differentiation of adipose-derived mesenchymal stem cells.

Authors:  Rui-peng Zhang; Jian-zhong Shao; Li-xin Xiang
Journal:  J Biol Chem       Date:  2011-09-14       Impact factor: 5.157

Review 8.  DNA methylation-based variation between human populations.

Authors:  Farzeen Kader; Meenu Ghai
Journal:  Mol Genet Genomics       Date:  2016-11-04       Impact factor: 3.291

9.  Epigenetic silencing of the c-fms locus during B-lymphopoiesis occurs in discrete steps and is reversible.

Authors:  Hiromi Tagoh; Alexandra Schebesta; Pascal Lefevre; Nicola Wilson; David Hume; Meinrad Busslinger; Constanze Bonifer
Journal:  EMBO J       Date:  2004-10-14       Impact factor: 11.598

10.  Promoter methylation analysis of O6-methylguanine-DNA methyltransferase in glioblastoma: detection by locked nucleic acid based quantitative PCR using an imprinted gene (SNURF) as a reference.

Authors:  Luca Morandi; Enrico Franceschi; Dario de Biase; Gianluca Marucci; Alicia Tosoni; Mario Ermani; Annalisa Pession; Giovanni Tallini; Alba Brandes
Journal:  BMC Cancer       Date:  2010-02-18       Impact factor: 4.430

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