Literature DB >> 11296255

On the role of the K-proton transfer pathway in cytochrome c oxidase.

M Brändén1, H Sigurdson, A Namslauer, R B Gennis, P Adelroth, P Brzezinski.   

Abstract

Cytochrome c oxidase is a membrane-bound enzyme that catalyzes the four-electron reduction of oxygen to water. This highly exergonic reaction drives proton pumping across the membrane. One of the key questions associated with the function of cytochrome c oxidase is how the transfer of electrons and protons is coupled and how proton transfer is controlled by the enzyme. In this study we focus on the function of one of the proton transfer pathways of the R. sphaeroides enzyme, the so-called K-proton transfer pathway (containing a highly conserved Lys(I-362) residue), leading from the protein surface to the catalytic site. We have investigated the kinetics of the reaction of the reduced enzyme with oxygen in mutants of the enzyme in which a residue [Ser(I-299)] near the entry point of the pathway was modified with the use of site-directed mutagenesis. The results show that during the initial steps of oxygen reduction, electron transfer to the catalytic site (to form the "peroxy" state, P(r)) requires charge compensation through the proton pathway, but no proton uptake from the bulk solution. The charge compensation is proposed to involve a movement of the K(I-362) side chain toward the binuclear center. Thus, in contrast to what has been assumed previously, the results indicate that the K-pathway is used during oxygen reduction and that K(I-362) is charged at pH approximately 7.5. The movement of the Lys is proposed to regulate proton transfer by "shutting off" the protonic connectivity through the K-pathway after initiation of the O(2) reduction chemistry. This "shutoff" prevents a short-circuit of the proton-pumping machinery of the enzyme during the subsequent reaction steps.

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Year:  2001        PMID: 11296255      PMCID: PMC33155          DOI: 10.1073/pnas.081088398

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  41 in total

1.  Polar residues in helix VIII of subunit I of cytochrome c oxidase influence the activity and the structure of the active site.

Authors:  J P Hosler; J P Shapleigh; D M Mitchell; Y Kim; M A Pressler; C Georgiou; G T Babcock; J O Alben; S Ferguson-Miller; R B Gennis
Journal:  Biochemistry       Date:  1996-08-20       Impact factor: 3.162

2.  The coupling of electron transfer and proton translocation: electrostatic calculations on Paracoccus denitrificans cytochrome c oxidase.

Authors:  A Kannt; C R Lancaster; H Michel
Journal:  Biophys J       Date:  1998-02       Impact factor: 4.033

3.  Role of the pathway through K(I-362) in proton transfer in cytochrome c oxidase from R. sphaeroides.

Authors:  P Adelroth; R B Gennis; P Brzezinski
Journal:  Biochemistry       Date:  1998-02-24       Impact factor: 3.162

4.  H2O2-induced conversion of cytochrome c oxidase peroxy complex to oxoferryl state.

Authors:  T V Vygodina; A A Konstantinov
Journal:  Ann N Y Acad Sci       Date:  1988       Impact factor: 5.691

5.  Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans.

Authors:  S Iwata; C Ostermeier; B Ludwig; H Michel
Journal:  Nature       Date:  1995-08-24       Impact factor: 49.962

6.  Internal electron transfer in cytochrome c oxidase from Rhodobacter sphaeroides.

Authors:  P Adelroth; P Brzezinski; B G Malmström
Journal:  Biochemistry       Date:  1995-03-07       Impact factor: 3.162

7.  Factors determining electron-transfer rates in cytochrome c oxidase: investigation of the oxygen reaction in the R. sphaeroides enzyme.

Authors:  P Adelroth; M Ek; P Brzezinski
Journal:  Biochim Biophys Acta       Date:  1998-10-05

8.  Resolution of the reaction sequence during the reduction of O2 by cytochrome oxidase.

Authors:  C Varotsis; Y Zhang; E H Appelman; G T Babcock
Journal:  Proc Natl Acad Sci U S A       Date:  1993-01-01       Impact factor: 11.205

9.  Dioxygen activation and bond cleavage by mixed-valence cytochrome c oxidase.

Authors:  D A Proshlyakov; M A Pressler; G T Babcock
Journal:  Proc Natl Acad Sci U S A       Date:  1998-07-07       Impact factor: 11.205

10.  The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 A.

Authors:  T Tsukihara; H Aoyama; E Yamashita; T Tomizaki; H Yamaguchi; K Shinzawa-Itoh; R Nakashima; R Yaono; S Yoshikawa
Journal:  Science       Date:  1996-05-24       Impact factor: 47.728

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  46 in total

1.  A single-amino-acid lid renders a gas-tight compartment within a membrane-bound transporter.

Authors:  Lina Salomonsson; Alex Lee; Robert B Gennis; Peter Brzezinski
Journal:  Proc Natl Acad Sci U S A       Date:  2004-08-02       Impact factor: 11.205

2.  Functional interactions between membrane-bound transporters and membranes.

Authors:  Linda Näsvik Ojemyr; Hyun Ju Lee; Robert B Gennis; Peter Brzezinski
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-23       Impact factor: 11.205

3.  Replacing Asn207 by aspartate at the neck of the D channel in the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides results in decoupling the proton pump.

Authors:  Dan Han; Andreas Namslauer; Ashtamurthy Pawate; Joel E Morgan; Stanislav Nagy; Ahmet S Vakkasoglu; Peter Brzezinski; Robert B Gennis
Journal:  Biochemistry       Date:  2006-11-28       Impact factor: 3.162

Review 4.  Energy transduction: proton transfer through the respiratory complexes.

Authors:  Jonathan P Hosler; Shelagh Ferguson-Miller; Denise A Mills
Journal:  Annu Rev Biochem       Date:  2006       Impact factor: 23.643

5.  The timing of proton migration in membrane-reconstituted cytochrome c oxidase.

Authors:  Lina Salomonsson; Kristina Faxén; Pia Adelroth; Peter Brzezinski
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-23       Impact factor: 11.205

6.  Mapping protein dynamics in catalytic intermediates of the redox-driven proton pump cytochrome c oxidase.

Authors:  Laura S Busenlehner; Lina Salomonsson; Peter Brzezinski; Richard N Armstrong
Journal:  Proc Natl Acad Sci U S A       Date:  2006-10-05       Impact factor: 11.205

7.  A mitochondrial DNA mutation linked to colon cancer results in proton leaks in cytochrome c oxidase.

Authors:  Ida Namslauer; Peter Brzezinski
Journal:  Proc Natl Acad Sci U S A       Date:  2009-02-13       Impact factor: 11.205

8.  Vectorial proton transfer coupled to reduction of O2 and NO by a heme-copper oxidase.

Authors:  Yafei Huang; Joachim Reimann; Håkan Lepp; Nadjia Drici; Pia Adelroth
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-11       Impact factor: 11.205

9.  Crystallographic location and mutational analysis of Zn and Cd inhibitory sites and role of lipidic carboxylates in rescuing proton path mutants in cytochrome c oxidase.

Authors:  Ling Qin; Denise A Mills; Carrie Hiser; Anna Murphree; R Michael Garavito; Shelagh Ferguson-Miller; Jonathan Hosler
Journal:  Biochemistry       Date:  2007-05-04       Impact factor: 3.162

10.  Impaired proton pumping in cytochrome c oxidase upon structural alteration of the D pathway.

Authors:  Håkan Lepp; Lina Salomonsson; Jia-Peng Zhu; Robert B Gennis; Peter Brzezinski
Journal:  Biochim Biophys Acta       Date:  2008-04-16
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