Literature DB >> 16306266

The timing of proton migration in membrane-reconstituted cytochrome c oxidase.

Lina Salomonsson1, Kristina Faxén, Pia Adelroth, Peter Brzezinski.   

Abstract

In mitochondria and aerobic bacteria energy conservation involves electron transfer through a number of membrane-bound protein complexes to O2. The reduction of O2, accompanied by the uptake of substrate protons to form H2O, is catalyzed by cytochrome c oxidase (CcO). This reaction is coupled to proton translocation (pumping) across the membrane such that each electron transfer to the catalytic site is linked to the uptake of two protons from one side and the release of one proton to the other side of the membrane. To address the mechanism of vectorial proton translocation, in this study we have investigated the solvent deuterium isotope effect of proton-transfer rates in CcO oriented in small unilamellar vesicles. Although in H2O the uptake and release reactions occur with the same rates, in D2O the substrate and pumped protons are taken up first (tau(D) congruent with 200 micros, "peroxy" to "ferryl" transition) followed by a significantly slower proton release to the other side of the membrane (tau(D) congruent with 1 ms). Thus, the results define the order and timing of the proton transfers during a pumping cycle. Furthermore, the results indicate that during CcO turnover internal electron transfer to the catalytic site is controlled by the release of the pumped proton, which suggests a mechanism by which CcO orchestrates a tight coupling between electron transfer and proton translocation.

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Year:  2005        PMID: 16306266      PMCID: PMC1345723          DOI: 10.1073/pnas.0505431102

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  48 in total

1.  Origins of deuterium kinetic isotope effects on the proton transfers of the bacteriorhodopsin photocycle.

Authors:  L S Brown; R Needleman; J K Lanyi
Journal:  Biochemistry       Date:  2000-02-08       Impact factor: 3.162

2.  The molecular machinery of Keilin's respiratory chain.

Authors:  P R Rich
Journal:  Biochem Soc Trans       Date:  2003-12       Impact factor: 5.407

3.  The catalytic cycle of cytochrome c oxidase is not the sum of its two halves.

Authors:  Dmitry Bloch; Ilya Belevich; Audrius Jasaitis; Camilla Ribacka; Anne Puustinen; Michael I Verkhovsky; Mårten Wikström
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-29       Impact factor: 11.205

4.  The X-ray crystal structures of wild-type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides.

Authors:  Margareta Svensson-Ek; Jeff Abramson; Gisela Larsson; Susanna Törnroth; Peter Brzezinski; So Iwata
Journal:  J Mol Biol       Date:  2002-08-09       Impact factor: 5.469

Review 5.  Proton translocation by bacteriorhodopsin and heme-copper oxidases.

Authors:  M Wikström
Journal:  Curr Opin Struct Biol       Date:  1998-08       Impact factor: 6.809

Review 6.  Proton-pumping cytochrome c oxidase.

Authors:  M Wikström; K Krab
Journal:  Biochim Biophys Acta       Date:  1979-08-17

7.  Structure at 2.8 A resolution of cytochrome c oxidase from Paracoccus denitrificans.

Authors:  S Iwata; C Ostermeier; B Ludwig; H Michel
Journal:  Nature       Date:  1995-08-24       Impact factor: 49.962

8.  Aspartate-407 in Rhodobacter sphaeroides cytochrome c oxidase is not required for proton pumping or manganese binding.

Authors:  J Qian; W Shi; M Pressler; C Hoganson; D Mills; G T Babcock; S Ferguson-Miller
Journal:  Biochemistry       Date:  1997-03-04       Impact factor: 3.162

9.  pH dependence of heme electrochemistry in cytochromes investigated by multiconformation continuum electrostatic calculations.

Authors:  K Hauser; J Mao; M R Gunner
Journal:  Biopolymers       Date:  2004 May-Jun 5       Impact factor: 2.505

10.  Factors determining electron-transfer rates in cytochrome c oxidase: investigation of the oxygen reaction in the R. sphaeroides enzyme.

Authors:  P Adelroth; M Ek; P Brzezinski
Journal:  Biochim Biophys Acta       Date:  1998-10-05
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  16 in total

Review 1.  Design of photoactive ruthenium complexes to study electron transfer and proton pumping in cytochrome oxidase.

Authors:  Bill Durham; Francis Millett
Journal:  Biochim Biophys Acta       Date:  2011-09-10

2.  Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system.

Authors:  Minoru Kubo; Satoru Nakashima; Satoru Yamaguchi; Takashi Ogura; Masao Mochizuki; Jiyoung Kang; Masaru Tateno; Kyoko Shinzawa-Itoh; Koji Kato; Shinya Yoshikawa
Journal:  J Biol Chem       Date:  2013-08-30       Impact factor: 5.157

3.  Replacing Asn207 by aspartate at the neck of the D channel in the aa3-type cytochrome c oxidase from Rhodobacter sphaeroides results in decoupling the proton pump.

Authors:  Dan Han; Andreas Namslauer; Ashtamurthy Pawate; Joel E Morgan; Stanislav Nagy; Ahmet S Vakkasoglu; Peter Brzezinski; Robert B Gennis
Journal:  Biochemistry       Date:  2006-11-28       Impact factor: 3.162

4.  Exploring pathways and barriers for coupled ET/PT in cytochrome c oxidase: a general framework for examining energetics and mechanistic alternatives.

Authors:  Mats H M Olsson; Per E M Siegbahn; Margareta R A Blomberg; Arieh Warshel
Journal:  Biochim Biophys Acta       Date:  2007-01-30

5.  Understanding the essential proton-pumping kinetic gates and decoupling mutations in cytochrome c oxidase.

Authors:  Ruibin Liang; Jessica M J Swanson; Mårten Wikström; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2017-05-23       Impact factor: 11.205

6.  Exploration of the cytochrome c oxidase pathway puzzle and examination of the origin of elusive mutational effects.

Authors:  Suman Chakrabarty; Ida Namslauer; Peter Brzezinski; Arieh Warshel
Journal:  Biochim Biophys Acta       Date:  2011-01-10

7.  Structural changes at the surface of cytochrome c oxidase alter the proton-pumping stoichiometry.

Authors:  Johan Berg; Jian Liu; Emelie Svahn; Shelagh Ferguson-Miller; Peter Brzezinski
Journal:  Biochim Biophys Acta Bioenerg       Date:  2019-11-14       Impact factor: 3.991

8.  Proton-transport mechanisms in cytochrome c oxidase revealed by studies of kinetic isotope effects.

Authors:  Ann-Louise Johansson; Suman Chakrabarty; Catrine L Berthold; Martin Högbom; Arieh Warshel; Peter Brzezinski
Journal:  Biochim Biophys Acta       Date:  2011-04-02

9.  Impaired proton pumping in cytochrome c oxidase upon structural alteration of the D pathway.

Authors:  Håkan Lepp; Lina Salomonsson; Jia-Peng Zhu; Robert B Gennis; Peter Brzezinski
Journal:  Biochim Biophys Acta       Date:  2008-04-16

10.  Glutamic acid 242 is a valve in the proton pump of cytochrome c oxidase.

Authors:  Ville R I Kaila; Michael I Verkhovsky; Gerhard Hummer; Mårten Wikström
Journal:  Proc Natl Acad Sci U S A       Date:  2008-04-22       Impact factor: 11.205

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