Literature DB >> 11293682

The effect of age and study duration on the relationship between 'clustering' of DNA fingerprint patterns and the proportion of tuberculosis disease attributable to recent transmission.

E Vynnycky1, N Nagelkerke, M W Borgdorff, D van Soolingen, J D van Embden, P E Fine.   

Abstract

Though it is recognized that the extent of 'clustering' of isolates from tuberculosis cases in a given population is related to the amount of disease attributable to recent transmission, the relationship between the two statistics is poorly understood. Given age-dependent risks of disease and the fact that a long study (e.g. spanning several years) is more likely to identify transmission-linked cases than a shorter study, both measures, and thus the relationship between them, probably depend strongly on the ages of the cases ascertained and study duration. The contribution of these factors is explored in this paper using an age-structured model which describes the introduction and transmission of M. tuberculosis strains with different DNA fingerprint patterns in The Netherlands during this century, assuming that the number of individuals contacted by each case varies between cases and that DNA fingerprint patterns change over time through random mutations, as observed in several studies. Model predictions of clustering in different age groups and over different time periods between 1993 and 1997 compare well against those observed. According to the model, the proportion of young cases with onset in a given time period who were 'clustered' underestimated the proportion of disease attributable to recent transmission in this age group (by up to 25% in males); for older individuals, clustering overestimated this proportion. These under- and overestimates decreased and increased respectively as the time period over which the cases were ascertained increased. These results have important implications for the interpretation of estimates of the proportion of disease attributable to recent transmission, based on 'clustering' statistics, as are being derived from studies of the molecular epidemiology of tuberculosis in many populations.

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Year:  2001        PMID: 11293682      PMCID: PMC2869673     

Source DB:  PubMed          Journal:  Epidemiol Infect        ISSN: 0950-2688            Impact factor:   2.451


  23 in total

Review 1.  The transmission of tuberculosis in the light of new molecular biological approaches.

Authors:  A Seidler; A Nienhaus; R Diel
Journal:  Occup Environ Med       Date:  2004-02       Impact factor: 4.402

Review 2.  Molecular epidemiology of tuberculosis: current insights.

Authors:  Barun Mathema; Natalia E Kurepina; Pablo J Bifani; Barry N Kreiswirth
Journal:  Clin Microbiol Rev       Date:  2006-10       Impact factor: 26.132

3.  Molecular epidemiology of tuberculosis after declining incidence, New York City, 2001-2003.

Authors:  C R Driver; B Kreiswirth; M Macaraig; C Clark; S S Munsiff; J Driscoll; B Zhao
Journal:  Epidemiol Infect       Date:  2006-10-26       Impact factor: 2.451

4.  A field-validated approach using surveillance and genotyping data to estimate tuberculosis attributable to recent transmission in the United States.

Authors:  Anne Marie France; Juliana Grant; J Steve Kammerer; Thomas R Navin
Journal:  Am J Epidemiol       Date:  2015-10-13       Impact factor: 4.897

Review 5.  Data needs for evidence-based decisions: a tuberculosis modeler's 'wish list'.

Authors:  D W Dowdy; C Dye; T Cohen
Journal:  Int J Tuberc Lung Dis       Date:  2013-07       Impact factor: 2.373

6.  Molecular characterization and drug resistance patterns of strains of Mycobacterium tuberculosis isolated from patients in an AIDS counseling center in Port-au-Prince, Haiti: a 1-year study.

Authors:  Séverine Ferdinand; Christophe Sola; Béatrice Verdol; Eric Legrand; Khye Seng Goh; Mylène Berchel; Alexandra Aubéry; Maryse Timothée; Patrice Joseph; Jean William Pape; Nalin Rastogi
Journal:  J Clin Microbiol       Date:  2003-02       Impact factor: 5.948

7.  Molecular epidemiology of tuberculosis in a sentinel surveillance population.

Authors:  Barbara A Ellis; Jack T Crawford; Christopher R Braden; Scott J N McNabb; Marisa Moore; Steve Kammerer
Journal:  Emerg Infect Dis       Date:  2002-11       Impact factor: 6.883

8.  DNA fngerprinting of Mycobacterium tuberculosis: lessons learned and implications for the future.

Authors:  Scott J N McNabb; Christopher R Braden; Thomas R Navin
Journal:  Emerg Infect Dis       Date:  2002-11       Impact factor: 6.883

9.  Transmission of tuberculosis in a South African community with a high prevalence of HIV infection.

Authors:  Keren Middelkoop; Barun Mathema; Landon Myer; Elena Shashkina; Andrew Whitelaw; Gilla Kaplan; Barry Kreiswirth; Robin Wood; Linda-Gail Bekker
Journal:  J Infect Dis       Date:  2014-07-22       Impact factor: 5.226

10.  Molecular epidemiology and evolutionary genetics of Mycobacterium tuberculosis in Taipei.

Authors:  Horng-Yunn Dou; Fan-Chen Tseng; Chih-Wei Lin; Jia-Ru Chang; Jun-Ren Sun; Wen-Shing Tsai; Shi-Yi Lee; Ih-Jen Su; Jang-Jih Lu
Journal:  BMC Infect Dis       Date:  2008-12-22       Impact factor: 3.090

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