Literature DB >> 11285245

Functional hemizygosity of PAFAH1B3 due to a PAFAH1B3-CLK2 fusion gene in a female with mental retardation, ataxia and atrophy of the brain.

H G Nothwang1, H G Kim, J Aoki, M Geisterfer, S Kübart, R D Wegner, A van Moers, L K Ashworth, T Haaf, J Bell, H Arai, N Tommerup, H H Ropers, J Wirth.   

Abstract

We report on the molecular characterization of a translocation t(1;19)(q21.3;q13.2) in a female with mental retardation, ataxia and atrophy of the brain. Sequence analysis of the breakpoints revealed an ALU:-repeat-mediated mechanism of recombination that led to truncation of two genes: the kinase CLK2 and PAFAH1B3, the gene product of which interacts with LIS1 as part of a heterotrimeric G protein complex PAF-AH1B. In addition, two reciprocal fusion genes are present. One expressed fusion gene encodes the first 136 amino acids of PAFAH1B3 followed by the complete CLK2 protein. Truncated PAFAH1B3 protein lost its potential to interact with LIS1 whereas CLK2 activity was conserved within the fusion protein. These data emphasize the importance of PAF-AH1B in brain development and functioning and demonstrate the first fusion gene apparently not associated with cancer.

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Year:  2001        PMID: 11285245     DOI: 10.1093/hmg/10.8.797

Source DB:  PubMed          Journal:  Hum Mol Genet        ISSN: 0964-6906            Impact factor:   6.150


  22 in total

1.  Partial deletion of GLRB and GRIA2 in a patient with intellectual disability.

Authors:  Karl Hackmann; Sarah Matko; Eva-Maria Gerlach; Maja von der Hagen; Barbara Klink; Evelin Schrock; Andreas Rump; Nataliya Di Donato
Journal:  Eur J Hum Genet       Date:  2012-06-06       Impact factor: 4.246

2.  Transcriptome profile in Williams-Beuren syndrome lymphoblast cells reveals gene pathways implicated in glucose intolerance and visuospatial construction deficits.

Authors:  Anna Antonell; Mireia Vilardell; Luis A Pérez Jurado
Journal:  Hum Genet       Date:  2010-04-17       Impact factor: 4.132

3.  Gene Fusion due to Chromosome Misconnection May Seriously Affect Your Health.

Authors:  Martin Poot
Journal:  Mol Syndromol       Date:  2015-03-26

Review 4.  Balanced translocations in mental retardation.

Authors:  Geert Vandeweyer; R Frank Kooy
Journal:  Hum Genet       Date:  2009-04-05       Impact factor: 4.132

Review 5.  Lissencephaly 1 linking to multiple diseases: mental retardation, neurodegeneration, schizophrenia, male sterility, and more.

Authors:  Orly Reiner; Sivan Sapoznik; Tamar Sapir
Journal:  Neuromolecular Med       Date:  2006       Impact factor: 3.843

Review 6.  Mechanisms of Origin, Phenotypic Effects and Diagnostic Implications of Complex Chromosome Rearrangements.

Authors:  Martin Poot; Thomas Haaf
Journal:  Mol Syndromol       Date:  2015-08-15

Review 7.  Fusion genes and their discovery using high throughput sequencing.

Authors:  M J Annala; B C Parker; W Zhang; M Nykter
Journal:  Cancer Lett       Date:  2013-01-29       Impact factor: 8.679

8.  Ataxia telangiectasia alters the ApoB and reelin pathway.

Authors:  Júlia Canet-Pons; Ralf Schubert; Ruth Pia Duecker; Roland Schrewe; Sandra Wölke; Matthias Kieslich; Martina Schnölzer; Andreas Chiocchetti; Georg Auburger; Stefan Zielen; Uwe Warnken
Journal:  Neurogenetics       Date:  2018-10-21       Impact factor: 2.660

9.  Characterization of apparently balanced chromosomal rearrangements from the developmental genome anatomy project.

Authors:  Anne W Higgins; Fowzan S Alkuraya; Amy F Bosco; Kerry K Brown; Gail A P Bruns; Diana J Donovan; Robert Eisenman; Yanli Fan; Chantal G Farra; Heather L Ferguson; James F Gusella; David J Harris; Steven R Herrick; Chantal Kelly; Hyung-Goo Kim; Shotaro Kishikawa; Bruce R Korf; Shashikant Kulkarni; Eric Lally; Natalia T Leach; Emma Lemyre; Janine Lewis; Azra H Ligon; Weining Lu; Richard L Maas; Marcy E MacDonald; Steven D P Moore; Roxanna E Peters; Bradley J Quade; Fabiola Quintero-Rivera; Irfan Saadi; Yiping Shen; Jay Shendure; Robin E Williamson; Cynthia C Morton
Journal:  Am J Hum Genet       Date:  2008-03       Impact factor: 11.025

10.  The Pafah1b complex interacts with the reelin receptor VLDLR.

Authors:  Guangcheng Zhang; Amir H Assadi; Robert S McNeil; Uwe Beffert; Anthony Wynshaw-Boris; Joachim Herz; Gary D Clark; Gabriella D'Arcangelo
Journal:  PLoS One       Date:  2007-02-28       Impact factor: 3.240

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