Literature DB >> 11283702

Emerging technologies in yeast genomics.

A Kumar1, M Snyder.   

Abstract

The genomic revolution is undeniable: in the past year alone, the term 'genomics' was found in nearly 500 research articles, and at least 6 journals are devoted solely to genomic biology. More than just a buzzword, molecular biology has genuinely embraced genomics (the systematic, large-scale study of genomes and their functions). With its facile genetics, the budding yeast Saccharomyces cerevisiae has emerged as an important model organism in the development of many current genomic methodologies. These techniques have greatly influenced the manner in which biology is studied in yeast and in other organisms. In this review, we summarize the most promising technologies in yeast genomics.

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Year:  2001        PMID: 11283702     DOI: 10.1038/35066084

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  21 in total

1.  Exon-specific RNAi: a tool for dissecting the functional relevance of alternative splicing.

Authors:  Alicia M Celotto; Brenton R Graveley
Journal:  RNA       Date:  2002-06       Impact factor: 4.942

2.  Teaching systems biology: an active-learning approach.

Authors:  Anuj Kumar
Journal:  Cell Biol Educ       Date:  2005

3.  Examining protein protein interactions using endogenously tagged yeast arrays: the cross-and-capture system.

Authors:  Bernhard Suter; Michael J Fetchko; Ralph Imhof; Christopher I Graham; Ingrid Stoffel-Studer; Caroline Zbinden; Maanasa Raghavan; Lianet Lopez; Lucija Beneti; Jacqueline Hort; Jeffrey Fillingham; Jack F Greenblatt; Guri Giaever; Corey Nislow; Igor Stagljar
Journal:  Genome Res       Date:  2007-11-07       Impact factor: 9.043

4.  Quantitative proteomics by metabolic labeling of model organisms.

Authors:  Joost W Gouw; Jeroen Krijgsveld; Albert J R Heck
Journal:  Mol Cell Proteomics       Date:  2009-11-19       Impact factor: 5.911

5.  Identification of essential genes in the human fungal pathogen Aspergillus fumigatus by transposon mutagenesis.

Authors:  Arnaud Firon; François Villalba; Roland Beffa; Christophe D'Enfert
Journal:  Eukaryot Cell       Date:  2003-04

Review 6.  Decoding sORF translation - from small proteins to gene regulation.

Authors:  Luis Enrique Cabrera-Quio; Sarah Herberg; Andrea Pauli
Journal:  RNA Biol       Date:  2016-08-12       Impact factor: 4.652

7.  Converging evidence of mitochondrial dysfunction in a yeast model of homocysteine metabolism imbalance.

Authors:  Arun Kumar; Lijo John; Shuvadeep Maity; Mini Manchanda; Abhay Sharma; Neeru Saini; Kausik Chakraborty; Shantanu Sengupta
Journal:  J Biol Chem       Date:  2011-04-19       Impact factor: 5.157

8.  Characterization of plasmid burden and copy number in Saccharomyces cerevisiae for optimization of metabolic engineering applications.

Authors:  Ashty S Karim; Kathleen A Curran; Hal S Alper
Journal:  FEMS Yeast Res       Date:  2012-11-20       Impact factor: 2.796

9.  Genome sequencing and comparative analysis of Saccharomyces cerevisiae strain YJM789.

Authors:  Wu Wei; John H McCusker; Richard W Hyman; Ted Jones; Ye Ning; Zhiwei Cao; Zhenglong Gu; Dan Bruno; Molly Miranda; Michelle Nguyen; Julie Wilhelmy; Caridad Komp; Raquel Tamse; Xiaojing Wang; Peilin Jia; Philippe Luedi; Peter J Oefner; Lior David; Fred S Dietrich; Yixue Li; Ronald W Davis; Lars M Steinmetz
Journal:  Proc Natl Acad Sci U S A       Date:  2007-07-25       Impact factor: 11.205

10.  Synthesis of DNA fragments in yeast by one-step assembly of overlapping oligonucleotides.

Authors:  Daniel G Gibson
Journal:  Nucleic Acids Res       Date:  2009-09-10       Impact factor: 16.971

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