Literature DB >> 11274404

Identification of a sequence element directing a protein to nuclear speckles.

J Eilbracht1, M S Schmidt-Zachmann.   

Abstract

SF3b(155) is an essential spliceosomal protein, highly conserved during evolution. It has been identified as a subunit of splicing factor SF3b, which, together with a second multimeric complex termed SF3a, interacts specifically with the 12S U2 snRNP and converts it into the active 17S form. The protein displays a characteristic intranuclear localization. It is diffusely distributed in the nucleoplasm but highly concentrated in defined intranuclear structures termed "speckles," a subnuclear compartment enriched in small ribonucleoprotein particles and various splicing factors. The primary sequence of SF3b(155) suggests a multidomain structure, different from those of other nuclear speckles components. To identify which part of SF3b(155) determines its specific intranuclear localization, we have constructed expression vectors encoding a series of epitope-tagged SF3b(155) deletion mutants as well as chimeric combinations of SF3b(155) sequences with the soluble cytoplasmic protein pyruvate kinase. Following transfection of cultured mammalian cells, we have identified (i) a functional nuclear localization signal of the monopartite type (KRKRR, amino acids 196--200) and (ii) a molecular segment with multiple threonine-proline repeats (amino acids 208--513), which is essential and sufficient to confer a specific accumulation in nuclear speckles. This latter sequence element, in particular amino acids 208--440, is required for correct subcellular localization of SF3b(155) and is also sufficient to target a reporter protein to nuclear speckles. Moreover, this "speckle-targeting sequence" transfers the capacity for interaction with other U2 snRNP components.

Entities:  

Mesh:

Substances:

Year:  2001        PMID: 11274404      PMCID: PMC31141          DOI: 10.1073/pnas.071042298

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

Review 1.  Intranuclear targeting of DNA replication factors.

Authors:  H Leonhardt; H P Rahn; M C Cardoso
Journal:  J Cell Biochem Suppl       Date:  1998

Review 2.  The structure and function of proteins involved in mammalian pre-mRNA splicing.

Authors:  A Krämer
Journal:  Annu Rev Biochem       Date:  1996       Impact factor: 23.643

3.  A potential role for U2AF-SAP 155 interactions in recruiting U2 snRNP to the branch site.

Authors:  O Gozani; J Potashkin; R Reed
Journal:  Mol Cell Biol       Date:  1998-08       Impact factor: 4.272

4.  Evidence that "pinin", reportedly a differentiation-specific desmosomal protein, is actually a widespread nuclear protein.

Authors:  J M Brandner; S Reidenbach; W W Franke
Journal:  Differentiation       Date:  1997-12       Impact factor: 3.880

5.  A novel helicase-type protein in the nucleolus: protein NOH61.

Authors:  R F Zirwes; J Eilbracht; S Kneissel; M S Schmidt-Zachmann
Journal:  Mol Biol Cell       Date:  2000-04       Impact factor: 4.138

Review 6.  The superfamily of arginine/serine-rich splicing factors.

Authors:  X D Fu
Journal:  RNA       Date:  1995-09       Impact factor: 4.942

7.  Thiophosphorylation of U1-70K protein inhibits pre-mRNA splicing.

Authors:  J Tazi; U Kornstädt; F Rossi; P Jeanteur; G Cathala; C Brunel; R Lührmann
Journal:  Nature       Date:  1993-05-20       Impact factor: 49.962

Review 8.  Conserved structures and diversity of functions of RNA-binding proteins.

Authors:  C G Burd; G Dreyfuss
Journal:  Science       Date:  1994-07-29       Impact factor: 47.728

9.  Identification and characterization of a novel kind of nuclear protein occurring free in the nucleoplasm and in ribonucleoprotein structures of the "speckle" type.

Authors:  J M Brandner; S Reidenbach; C Kuhn; W W Franke
Journal:  Eur J Cell Biol       Date:  1998-04       Impact factor: 4.492

10.  Protein localization to the nucleolus: a search for targeting domains in nucleolin.

Authors:  M S Schmidt-Zachmann; E A Nigg
Journal:  J Cell Sci       Date:  1993-07       Impact factor: 5.285

View more
  17 in total

1.  The spatial targeting and nuclear matrix binding domains of SRm160.

Authors:  Stefan Wagner; Simion Chiosea; Jeffrey A Nickerson
Journal:  Proc Natl Acad Sci U S A       Date:  2003-03-06       Impact factor: 11.205

Review 2.  Nuclear speckles.

Authors:  David L Spector; Angus I Lamond
Journal:  Cold Spring Harb Perspect Biol       Date:  2011-02-01       Impact factor: 10.005

3.  Dimerization and a novel Tax speckled structure localization signal are required for Tax nuclear localization.

Authors:  Kimberly A Fryrear; Sarah S Durkin; Saurabh K Gupta; Jessica B Tiedebohl; O John Semmes
Journal:  J Virol       Date:  2009-03-25       Impact factor: 5.103

4.  A distinct bipartite motif is required for the localization of inhibitory kappaB-like (IkappaBL) protein to nuclear speckles.

Authors:  Jennifer I Semple; Stephanie E Brown; Christopher M Sanderson; R Duncan Campbell
Journal:  Biochem J       Date:  2002-02-01       Impact factor: 3.857

5.  Nuclear particles containing RNA polymerase III complexes associated with the junctional plaque protein plakophilin 2.

Authors:  C Mertens; I Hofmann; Z Wang; M Teichmann; S Sepehri Chong; M Schnölzer; W W Franke
Journal:  Proc Natl Acad Sci U S A       Date:  2001-06-19       Impact factor: 11.205

6.  A novel splicing regulator shares a nuclear import pathway with SR proteins.

Authors:  Ming-Chih Lai; Hao-Wei Kuo; Wen-Cheng Chang; Woan-Yuh Tarn
Journal:  EMBO J       Date:  2003-03-17       Impact factor: 11.598

7.  Altered localization of retinoid X receptor alpha coincides with loss of retinoid responsiveness in human breast cancer MDA-MB-231 cells.

Authors:  T Tanaka; B L Dancheck; L C Trifiletti; R E Birnkrant; B J Taylor; S H Garfield; U Thorgeirsson; L M De Luca
Journal:  Mol Cell Biol       Date:  2004-05       Impact factor: 4.272

8.  Analysis of influenza B Virus NS1 protein trafficking reveals a novel interaction with nuclear speckle domains.

Authors:  Jana Schneider; Bianca Dauber; Krister Melén; Ilkka Julkunen; Thorsten Wolff
Journal:  J Virol       Date:  2008-11-05       Impact factor: 5.103

9.  Genome-wide analysis of histidine repeats reveals their role in the localization of human proteins to the nuclear speckles compartment.

Authors:  Eulàlia Salichs; Alice Ledda; Loris Mularoni; M Mar Albà; Susana de la Luna
Journal:  PLoS Genet       Date:  2009-03-06       Impact factor: 5.917

10.  Different requirements of the kinase and UHM domains of KIS for its nuclear localization and binding to splicing factors.

Authors:  Valérie Manceau; Clara L Kielkopf; André Sobel; Alexandre Maucuer
Journal:  J Mol Biol       Date:  2008-06-17       Impact factor: 5.469

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.