Literature DB >> 11266589

Second virial coefficients as a measure of protein--osmolyte interactions.

G T Weatherly1, G J Pielak.   

Abstract

The cytoplasm contains high concentrations of cosolutes. These cosolutes include macromolecules and small organic molecules called osmolytes. However, most biophysical studies of proteins are conducted in dilute solutions. Two broad classes of models have been used to describe the interaction between osmolytes and proteins. One class focuses on excluded volume effects, while the other focuses on binding between the protein and the osmolyte. To better understand protein--smolyte interactions, we have conducted sedimentation equilibrium analytical ultracentrifugation experiments using ferricytochrome c as a model protein. From these experiments, we determined the second virial coefficients for a series of osmolytes. We have interpreted the second virial coefficient as a measure of both excluded volume and protein--osmolyte binding. We conclude that simple models are not sufficient to understand the interactions between osmolytes and proteins.

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Year:  2001        PMID: 11266589      PMCID: PMC2249838          DOI: 10.1110/ps.29301

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  18 in total

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Authors:  H K SCHACHMAN; M A LAUFFER
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Journal:  Annu Rev Biophys Biomol Struct       Date:  1993

5.  Probing protein-sugar interactions.

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Journal:  Biophys J       Date:  2000-01       Impact factor: 4.033

6.  Living with water stress: evolution of osmolyte systems.

Authors:  P H Yancey; M E Clark; S C Hand; R D Bowlus; G N Somero
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7.  Analysis of data from the analytical ultracentrifuge by nonlinear least-squares techniques.

Authors:  M L Johnson; J J Correia; D A Yphantis; H R Halvorson
Journal:  Biophys J       Date:  1981-12       Impact factor: 4.033

8.  Vapor pressure osmometry studies of osmolyte-protein interactions: implications for the action of osmoprotectants in vivo and for the interpretation of "osmotic stress" experiments in vitro.

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Authors:  R L Cutler; G J Pielak; A G Mauk; M Smith
Journal:  Protein Eng       Date:  1987 Feb-Mar

10.  Oxidation state-dependent conformational changes in cytochrome c.

Authors:  A M Berghuis; G D Brayer
Journal:  J Mol Biol       Date:  1992-02-20       Impact factor: 5.469

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  6 in total

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5.  Thermodynamic perspective on the dock-lock growth mechanism of amyloid fibrils.

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6.  The osmolyte trimethylamine-N-oxide stabilizes the Fyn SH3 domain without altering the structure of its folding transition state.

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  6 in total

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