Literature DB >> 11259283

The formation and dynamics of proton wires in channel environments.

M L Brewer1, U W Schmitt, G A Voth.   

Abstract

By virtue of an accurate interaction model, the equilibrium and dynamical properties of an excess proton in aqueous systems are studied, in which the water and excess proton are confined to hydrophobic cylindrical channels. Solvation structures of the excess proton and its mobility along the channel are considered as a function of the channel radius. It is found that when the aqueous proton systems are sufficiently constricted there is a substantial increase in the diffusion of the excess proton charge accompanied by a decrease in the diffusion of water molecules along the channel. Such systems present clear evidence for the possible existence of "proton wires."

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Year:  2001        PMID: 11259283      PMCID: PMC1301359          DOI: 10.1016/S0006-3495(01)76140-1

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  13 in total

1.  Proton mobilities in water and in different stereoisomers of covalently linked gramicidin A channels.

Authors:  S Cukierman
Journal:  Biophys J       Date:  2000-04       Impact factor: 4.033

2.  Three-dimensional Poisson-Nernst-Planck theory studies: influence of membrane electrostatics on gramicidin A channel conductance.

Authors:  A E Cárdenas; R D Coalson; M G Kurnikova
Journal:  Biophys J       Date:  2000-07       Impact factor: 4.033

3.  Proton transport across transient single-file water pores in a lipid membrane studied by molecular dynamics simulations.

Authors:  S J Marrink; F Jähnig; H J Berendsen
Journal:  Biophys J       Date:  1996-08       Impact factor: 4.033

4.  Free energy profiles for H+ conduction along hydrogen-bonded chains of water molecules.

Authors:  R Pomès; B Roux
Journal:  Biophys J       Date:  1998-07       Impact factor: 4.033

5.  Dynamic properties of Na+ ions in models of ion channels: a molecular dynamics study.

Authors:  G R Smith; M S Sansom
Journal:  Biophys J       Date:  1998-12       Impact factor: 4.033

Review 6.  Theory of passive proton conductance in lipid bilayers.

Authors:  J F Nagle
Journal:  J Bioenerg Biomembr       Date:  1987-10       Impact factor: 2.945

Review 7.  Proton permeation of lipid bilayers.

Authors:  D W Deamer
Journal:  J Bioenerg Biomembr       Date:  1987-10       Impact factor: 2.945

8.  Noncontact dipole effects on channel permeation. III. Anomalous proton conductance effects in gramicidin.

Authors:  L R Phillips; C D Cole; R J Hendershot; M Cotten; T A Cross; D D Busath
Journal:  Biophys J       Date:  2008-11-21       Impact factor: 4.033

9.  Water in channel-like cavities: structure and dynamics.

Authors:  M S Sansom; I D Kerr; J Breed; R Sankararamakrishnan
Journal:  Biophys J       Date:  1996-02       Impact factor: 4.033

10.  Net proton-hydroxyl permeability of large unilamellar liposomes measured by an acid-base titration technique.

Authors:  J W Nichols; D W Deamer
Journal:  Proc Natl Acad Sci U S A       Date:  1980-04       Impact factor: 11.205

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  36 in total

1.  Molecular dynamics simulation of proton transport near the surface of a phospholipid membrane.

Authors:  Alexander M Smondyrev; Gregory A Voth
Journal:  Biophys J       Date:  2002-03       Impact factor: 4.033

2.  Molecular dynamics simulation of proton transport through the influenza A virus M2 channel.

Authors:  Alexander M Smondyrev; Gregory A Voth
Journal:  Biophys J       Date:  2002-10       Impact factor: 4.033

3.  Protons may leak through pure lipid bilayers via a concerted mechanism.

Authors:  Harald L Tepper; Gregory A Voth
Journal:  Biophys J       Date:  2005-02-04       Impact factor: 4.033

4.  Computer simulation of explicit proton translocation in cytochrome c oxidase: the D-pathway.

Authors:  Jiancong Xu; Gregory A Voth
Journal:  Proc Natl Acad Sci U S A       Date:  2005-04-27       Impact factor: 11.205

5.  Charge delocalization in proton channels, I: the aquaporin channels and proton blockage.

Authors:  Hanning Chen; Boaz Ilan; Yujie Wu; Fangqiang Zhu; Klaus Schulten; Gregory A Voth
Journal:  Biophys J       Date:  2006-10-20       Impact factor: 4.033

6.  Claudin-8 modulates paracellular permeability to acidic and basic ions in MDCK II cells.

Authors:  Susanne Angelow; Kwang-Jin Kim; Alan S L Yu
Journal:  J Physiol       Date:  2005-12-01       Impact factor: 5.182

Review 7.  Proton solvation and transport in aqueous and biomolecular systems: insights from computer simulations.

Authors:  Jessica M J Swanson; C Mark Maupin; Hanning Chen; Matt K Petersen; Jiancong Xu; Yujie Wu; Gregory A Voth
Journal:  J Phys Chem B       Date:  2007-04-13       Impact factor: 2.991

Review 8.  Philosophy of voltage-gated proton channels.

Authors:  Thomas E DeCoursey; Jonathan Hosler
Journal:  J R Soc Interface       Date:  2013-12-18       Impact factor: 4.118

Review 9.  Theory of coupled electron and proton transfer reactions.

Authors:  Sharon Hammes-Schiffer; Alexei A Stuchebrukhov
Journal:  Chem Rev       Date:  2010-11-04       Impact factor: 60.622

10.  Lewis-inspired representation of dissociable water in clusters and Grotthuss chains.

Authors:  Seyit Kale; Judith Herzfeld; Stacy Dai; Michael Blank
Journal:  J Biol Phys       Date:  2011-06-04       Impact factor: 1.365

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