Literature DB >> 11248406

Prediction of aqueous solubility for a diverse set of organic compounds based on atom-type electrotopological state indices.

J Huuskonen1, J Rantanen, D Livingstone.   

Abstract

We describe robust methods for estimating the aqueous solubility of a set of 734 organic compounds from different structural classes based on multiple linear regression (MLR) and artificial neural networks (ANN) model. The structures were represented by atom-type electrotopological state (E-state) indices. The squared correlation coefficient and standard deviation for the MLR with 34 structural parameters were r(2) = 0.94 and s = 0.58 for the training set of 675 compounds. For the test set of 21 compounds, the equivalent statistics were r(2)(pred) = 0.80 and s = 0.87, respectively. Neural networks gave a significant improvement using the same set of parameters, and the standard deviations were s = 0.52 for the training set and s = 0.75 for the test set when an artificial neural network with five neurons in the hidden layer was used. The results clearly show that accurate models can be rapidly calculated for the estimation of aqueous solubility for a large and diverse set of organic compounds using easily calculated structural parameters.

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Year:  2000        PMID: 11248406     DOI: 10.1016/s0223-5234(00)01186-7

Source DB:  PubMed          Journal:  Eur J Med Chem        ISSN: 0223-5234            Impact factor:   6.514


  6 in total

1.  Simultaneous prediction of aqueous solubility and octanol/water partition coefficient based on descriptors derived from molecular structure.

Authors:  D J Livingstone; M G Ford; J J Huuskonen; D W Salt
Journal:  J Comput Aided Mol Des       Date:  2001-08       Impact factor: 3.686

Review 2.  Theoretical predictions of drug absorption in drug discovery and development.

Authors:  Patric Stenberg; Christel A S Bergström; Kristina Luthman; Per Artursson
Journal:  Clin Pharmacokinet       Date:  2002       Impact factor: 6.447

3.  In silico modeling of non-linear drug absorption for the P-gp substrate talinolol and of consequences for the resulting pharmacodynamic effect.

Authors:  Marija Tubic; Daniel Wagner; Hilde Spahn-Langguth; Michael B Bolger; Peter Langguth
Journal:  Pharm Res       Date:  2006-08       Impact factor: 4.200

4.  Evaluation of Deep Learning Architectures for Aqueous Solubility Prediction.

Authors:  Gihan Panapitiya; Michael Girard; Aaron Hollas; Jonathan Sepulveda; Vijayakumar Murugesan; Wei Wang; Emily Saldanha
Journal:  ACS Omega       Date:  2022-04-25

5.  Pruned Machine Learning Models to Predict Aqueous Solubility.

Authors:  Alexander L Perryman; Daigo Inoyama; Jimmy S Patel; Sean Ekins; Joel S Freundlich
Journal:  ACS Omega       Date:  2020-07-01

6.  Prediction of aqueous intrinsic solubility of druglike molecules using Random Forest regression trained with Wiki-pS0 database.

Authors:  Alex Avdeef
Journal:  ADMET DMPK       Date:  2020-03-04
  6 in total

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