Literature DB >> 11248235

Direct observation of two distinct affinity conformations in the T state human deoxyhemoglobin.

N Shibayama1, S Saigo.   

Abstract

The main features of cooperative oxygenation of human hemoglobin have been described by assuming the equilibrium between two affinity conformations of the entire molecule, T and R. However, the molecular basis for explaining the wide variation in the O(2) affinities of the deoxy T state has remained obscure. We address this long-standing issue by trapping the conformational states of deoxyhemoglobin molecules within wet porous transparent silicate sol-gels. The equilibrium O(2) binding measurements of the encapsulated deoxyhemoglobin samples showed that deoxyhemoglobin free of anions coexists in two conformations that differ in O(2) affinity by 40 times or more, and addition of inositol hexaphosphate to this anion-free deoxyhemoglobin brings about a very slow redistribution of these affinity conformations. These results are the first, direct demonstration of the existence of equilibrium between two (at least two) functionally distinguishable conformational states in the T state deoxyhemoglobin.

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Year:  2001        PMID: 11248235     DOI: 10.1016/s0014-5793(01)02225-6

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  18 in total

1.  High and low oxygen affinity conformations of T state hemoglobin.

Authors:  S Bruno; M Bonaccio; S Bettati; C Rivetti; C Viappiani; S Abbruzzetti; A Mozzarelli
Journal:  Protein Sci       Date:  2001-11       Impact factor: 6.725

2.  The role of hydration on the mechanism of allosteric regulation: in situ measurements of the oxygen-linked kinetics of water binding to hemoglobin.

Authors:  Andrés G Salvay; J Raúl Grigera; Marcio F Colombo
Journal:  Biophys J       Date:  2003-01       Impact factor: 4.033

3.  New insights into allosteric mechanisms from trapping unstable protein conformations in silica gels.

Authors:  Cristiano Viappiani; Stefano Bettati; Stefano Bruno; Luca Ronda; Stefania Abbruzzetti; Andrea Mozzarelli; William A Eaton
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-22       Impact factor: 11.205

4.  Unfolding of Green Fluorescent Protein mut2 in wet nanoporous silica gels.

Authors:  Barbara Campanini; Sara Bologna; Fabio Cannone; Giuseppe Chirico; Andrea Mozzarelli; Stefano Bettati
Journal:  Protein Sci       Date:  2005-03-31       Impact factor: 6.725

5.  Tracking unfolding and refolding of single GFPmut2 molecules.

Authors:  Fabio Cannone; Sara Bologna; Barbara Campanini; Alberto Diaspro; Stefano Bettati; Andrea Mozzarelli; Giuseppe Chirico
Journal:  Biophys J       Date:  2005-07-01       Impact factor: 4.033

6.  Modulation of reactivity and conformation within the T-quaternary state of human hemoglobin: the combined use of mutagenesis and sol-gel encapsulation.

Authors:  Uri Samuni; Camille J Roche; David Dantsker; Laura J Juszczak; Joel M Friedman
Journal:  Biochemistry       Date:  2006-03-07       Impact factor: 3.162

7.  Circular dichroism spectroscopy of tertiary and quaternary conformations of human hemoglobin entrapped in wet silica gels.

Authors:  Luca Ronda; Stefano Bruno; Cristiano Viappiani; Stefania Abbruzzetti; Andrea Mozzarelli; Kenneth C Lowe; Stefano Bettati
Journal:  Protein Sci       Date:  2006-07-05       Impact factor: 6.725

8.  Conformational kinetics reveals affinities of protein conformational states.

Authors:  Kyle G Daniels; Yang Suo; Terrence G Oas
Journal:  Proc Natl Acad Sci U S A       Date:  2015-07-10       Impact factor: 11.205

9.  Tertiary and quaternary allostery in tetrameric hemoglobin from Scapharca inaequivalvis.

Authors:  Luca Ronda; Stefano Bettati; Eric R Henry; Tara Kashav; Jeffrey M Sanders; William E Royer; Andrea Mozzarelli
Journal:  Biochemistry       Date:  2013-03-15       Impact factor: 3.162

10.  Interfacial and distal-heme pocket mutations exhibit additive effects on the structure and function of hemoglobin.

Authors:  David H Maillett; Virgil Simplaceanu; Tong-Jian Shen; Nancy T Ho; John S Olson; Chien Ho
Journal:  Biochemistry       Date:  2008-09-13       Impact factor: 3.162

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